// @(#)root/tmva $Id: Tools.h,v 1.2 2006/05/23 13:03:15 brun Exp $
// Author: Andreas Hoecker, Joerg Stelzer, Helge Voss, Kai Voss

/**********************************************************************************
 * Project: TMVA - a Root-integrated toolkit for multivariate data analysis       *
 * Package: TMVA                                                                  *
 * Class  : Tools                                                                 *
 *                                                                                *
 * Description:                                                                   *
 *      Global auxiliary applications and data treatment routines                 *
 *                                                                                *
 * Authors (alphabetical):                                                        *
 *      Andreas Hoecker <Andreas.Hocker@cern.ch> - CERN, Switzerland              *
 *      Xavier Prudent  <prudent@lapp.in2p3.fr>  - LAPP, France                   *
 *      Helge Voss      <Helge.Voss@cern.ch>     - MPI-KP Heidelberg, Germany     *
 *      Kai Voss        <Kai.Voss@cern.ch>       - U. of Victoria, Canada         *
 *                                                                                *
 * Copyright (c) 2005:                                                            *
 *      CERN, Switzerland,                                                        *
 *      U. of Victoria, Canada,                                                   *
 *      MPI-KP Heidelberg, Germany,                                               *
 *      LAPP, Annecy, France                                                      *
 *                                                                                *
 * Redistribution and use in source and binary forms, with or without             *
 * modification, are permitted according to the terms listed in LICENSE           *
 * (http://mva.sourceforge.net/license.txt)                                       *
 *                                                                                *
 * File and Version Information:                                                  *
 * $Id: Tools.h,v 1.2 2006/05/23 13:03:15 brun Exp $
 **********************************************************************************/

#ifndef ROOT_TMVA_Tools
#define ROOT_TMVA_Tools

//////////////////////////////////////////////////////////////////////////
//                                                                      //
// Tools (namespace)                                                    //
//                                                                      //
// Global auxiliary applications and data treatment routines            //
//                                                                      //
//////////////////////////////////////////////////////////////////////////

#include <vector>
#include <string>

#include "TList.h"

#ifndef ROOT_TMVA_Event
#include "TMVA/Event.h"
#endif

#ifndef ROOT_TMVA_TMatrixDSymEigen
#include "TMatrixDSymEigen.h"
#endif

class TTree;
class TH1;
class TSpline;

#define __N__(a1,a2,a3) Tools::NormVariable(a1,a2,a3)

using std::vector;

namespace TMVA {

   namespace Tools {

      //  TString GetName( void ) { return "Tools"; }

      // simple statistics operations on tree entries
      void  ComputeStat( TTree* theTree, TString theVarName,
                         Double_t&, Double_t&, Double_t&,
                         Double_t&, Double_t&, Double_t&, Bool_t norm = kFALSE );

      // simple statistics operations on Events in a Vector collection class
      void  ComputeStat( std::vector<Event*>, Int_t ivar,
                         Double_t&, Double_t&, Double_t&,
                         Double_t&, Double_t&, Double_t&, Bool_t norm = kFALSE );



      // creates histograms normalized to one
      TH1* projNormTH1F( TTree* theTree, TString theVarName,
                         TString name, Int_t nbins,
                         Double_t xmin, Double_t xmax, TString cut );

      // normalize histogram by its integral
      Double_t NormHist( TH1* theHist, Double_t norm = 1.0 );

      // parser for TString phrase with items separated by ':'
      TList* ParseFormatLine( TString theString );

      // returns covariance matrix for all variables in tree
      void GetCovarianceMatrix( TTree* theTree, TMatrixDBase *theMatrix,
                                vector<TString>* theVars, Int_t theType, Bool_t norm = kFALSE );

      // returns correlation matrix for all variables in tree
      void GetCorrelationMatrix( TTree* theTree, TMatrixDBase *theMatrix,
                                 vector<TString>* theVars, Int_t theType );

      // returns the square-root of a symmetric matrix: symMat = sqrtMat*sqrtMat
      void GetSQRootMatrix( TMatrixDSym* symMat, TMatrixD* sqrtMat );

      // type-safe accessor to TTree elements
      Double_t GetValue( TTree *theTree, Int_t entry, TString varname );

      // check spline quality by comparison with initial histogram
      Bool_t CheckSplines( TH1*, TSpline* );

      // normalization of variable output
      Double_t NormVariable( Double_t x, Double_t xmin, Double_t xmax );

      // vector rescaling
      vector<Double_t> MVADiff( vector<Double_t>&, vector<Double_t>& );
      void Scale     ( vector<Double_t>&, Double_t );
      void Scale     ( vector<Float_t> &, Float_t  );

      // re-arrange a vector of arrays (vectors) in a way such that the first array
      // is ordered, and the other arrays reshuffeld accordingly
      void UsefulSortDescending( vector< vector<Double_t> >&, vector<TString>* vs = 0 );
      void UsefulSortAscending ( vector< vector<Double_t> >& );

      void UsefulSortDescending( vector<Double_t>& );
      void UsefulSortAscending ( vector<Double_t>& );

      Int_t GetIndexMaxElement ( vector<Double_t>& );
      Int_t GetIndexMinElement ( vector<Double_t>& );

   }

} // namespace TMVA

#endif