[root] / trunk / math / mathcore / inc / Math / Minimizer.h Repository:
ViewVC logotype

View of /trunk/math/mathcore/inc/Math/Minimizer.h

Parent Directory Parent Directory | Revision Log Revision Log


Revision 25486 - (download) (as text) (annotate)
Mon Sep 22 12:43:03 2008 UTC (6 years, 4 months ago) by moneta
File size: 11072 byte(s)
import changes from math development branches for subdirectory math. List of changes in detail: 

mathcore: 
---------
  MinimizerOptions: 
	new  class for storing Minimizer option, with static default values that can be 
	changed by the user

  FitConfig: 
   	- use default values from MinimizerOption class
   	- rename method to create parameter settings from a function

  FitUtil.cxx:   
    	improve the derivative calculations used in the effective chi2 and in Fumili and 
	fix a bug for evaluation of likelihood or chi2 terms. 
	In  EvaluatePdf() work and return  the log of the pdf. 
      
  FitResult:
	- improve the class by adding extra information like, num. of free parameters, 
	minimizer status, global correlation coefficients, information about fixed 
	and bound parameters. 
   	- add method for getting fit confidence intervals 
  	- improve print method   

  DataRange: 
	add method SetRange to distinguish from AddRange. SetRange deletes the existing 
	ranges. 

  ParamsSettings: make few methods const

  FCN functions (Chi2FCN, LogLikelihoodFCN, etc..) 
	move some common methods and data members in base class (FitMethodFunction)

  RootFinder: add template Solve() for any callable function.  

mathmore:
--------
  minimizer classes: fill status information
  GSLNLSMinimizer: return error and covariance matrix 

minuit2: 
-------
  Minuit2Minimizer: fill  status information 
  DavidonErrorUpdator: check that delgam or gvg are not zero ( can happen when dg = 0)
  FumiliFCNAdapter: work on the log of pdf

minuit:
------- 
  TLinearMinimizer: add support for robust fitting
  TMinuitMinimizer: fill status information and fix a bug in filling the correlation matrix. 
 fumili:
 ------ 
  add TFumiliMinimizer: 
	wrapper class for TFumili using Minimizer interface

// @(#)root/mathcore:$Id$
// Author: L. Moneta Fri Sep 22 15:06:47 2006

/**********************************************************************
 *                                                                    *
 * Copyright (c) 2006  LCG ROOT Math Team, CERN/PH-SFT                *
 *                                                                    *
 *                                                                    *
 **********************************************************************/

// Header file for class Minimizer

#ifndef ROOT_Math_Minimizer
#define ROOT_Math_Minimizer

#ifndef ROOT_Math_IFunction
#include "Math/IFunction.h"
#endif


#include <vector> 
#include <string> 

#include <limits> 
#include <cmath>

//#define DEBUG
#ifdef DEBUG
#include <iostream> 
#endif

namespace ROOT { 
   

   namespace Math { 

/**
   @defgroup MultiMin Multi-dimensional Minimization
   @ingroup NumAlgo

   Classes implementing algorithms for multi-dimensional minimization 
 */



//_______________________________________________________________________________
/** 
   Abstract Minimizer class, defining  the interface for the various minimizer
   (like Minuit2, Minuit, GSL, etc..) 
   Plug-in's exist in ROOT to be able to instantiate the derived classes like 
   ROOT::Math::GSLMinimizer or ROOT::Math::Minuit2Minimizer via the 
   plug-in manager.

   Provides interface for setting the function to be minimized. 
   The function must  implemente the multi-dimensional generic interface
   ROOT::Math::IBaseFunctionMultiDim. 
   If the function provides gradient calculation 
   (implements the ROOT::Math::IGradientFunctionMultiDim interface) this will be 
   used by the Minimizer. 

   It Defines also interface for setting the initial values for the function variables (which are the parameters in 
   of the model function in case of solving for fitting) and especifying their limits. 

   It defines the interface to set and retrieve basic minimization parameters 
   (for specific Minimizer parameters one must use the derived classes). 

   Then it defines the interface to retrieve the result of minimization ( minimum X values, function value, 
   gradient, error on the mimnimum, etc...)

   @ingroup MultiMin
*/
 
class Minimizer {

public: 

   /** 
      Default constructor
   */ 
   Minimizer () : 
      fValidError(false),
#ifndef DEBUG
      fDebug(0), 
#else
      fDebug(3),
#endif 
      fStrategy(1),
      fStatus(-1),
      fMaxCalls(0), 
      fMaxIter(0),
      fTol(1.E-6), 
      fUp(1.)
   {} 

   /** 
      Destructor (no operations)
   */ 
   virtual ~Minimizer ()  {}  




private:
   // usually copying is non trivial, so we make this unaccessible

   /** 
      Copy constructor
   */ 
   Minimizer(const Minimizer &) {} 

   /** 
      Assignment operator
   */ 
   Minimizer & operator = (const Minimizer & rhs)  {
      if (this == &rhs) return *this;  // time saving self-test
      return *this;
   }

public: 
   
   /// reset for consecutive minimizations - implement if needed 
   virtual void Clear() {}

   /// set the function to minimize
   virtual void SetFunction(const ROOT::Math::IMultiGenFunction & func) = 0; 

   /// set a function to minimize using gradient 
   virtual void SetFunction(const ROOT::Math::IMultiGradFunction & func) 
   {
      SetFunction(static_cast<const ::ROOT::Math::IMultiGenFunction &> (func));
   }
   

   /// add variables  . Return number of variables succesfully added
   template<class VariableIterator> 
   int SetVariables(const VariableIterator & begin, const VariableIterator & end) { 
      unsigned int ivar = 0; 
      for ( VariableIterator vitr = begin; vitr != end; ++vitr) { 
#ifdef DEBUG
         std::cout << "adding variable " << ivar << "  " << vitr->Name(); 
         if (vitr->IsDoubleBound() ) std::cout << " bounded to [ " <<  vitr->LowerLimit() << " , " <<  vitr->UpperLimit() << " ] ";
         std::cout << std::endl; 
#endif
         bool iret = false; 
         if (vitr->IsFixed() )
            iret = SetFixedVariable(ivar,  vitr->Name(), vitr->Value() ); 
         else if (vitr->IsDoubleBound() )
            iret = SetLimitedVariable(ivar,  vitr->Name(), vitr->Value(), vitr->StepSize(), vitr->LowerLimit(), vitr->UpperLimit() );
         else if (vitr->HasLowerLimit() )
            iret = SetLowerLimitedVariable(ivar,  vitr->Name(), vitr->Value(), vitr->StepSize(), vitr->LowerLimit() );
         else if (vitr->HasUpperLimit() )
            iret = SetUpperLimitedVariable(ivar,  vitr->Name(), vitr->Value(), vitr->StepSize(), vitr->UpperLimit() );
         else 
            iret = SetVariable( ivar, vitr->Name(), vitr->Value(), vitr->StepSize() ); 

         if (iret) ivar++; 
#ifdef DEBUG
         if (iret) 
            std::cout << "Added variable " << vitr->Name() << " val = " << vitr->Value() << " step " << vitr->StepSize() 
                      << std::endl; 
         else 
            std::cout << "Failed to Add variable " << vitr->Name() << std::endl; 
#endif

      }
      return ivar; 
   }
   /// set free variable 
   virtual bool SetVariable(unsigned int ivar, const std::string & name, double val, double step) = 0; 
   /// set lower limit variable  (override if minimizer supports them )
   virtual bool SetLowerLimitedVariable(unsigned int  ivar , const std::string & name , double val , double step , double lower ) { 
      return SetLimitedVariable(ivar, name, val, step, lower, std::numeric_limits<double>::infinity() );  
   } 
   /// set upper limit variable (override if minimizer supports them )
   virtual bool SetUpperLimitedVariable(unsigned int ivar , const std::string & name , double val , double step , double upper ) { 
      return SetLimitedVariable(ivar, name, val, step, - std::numeric_limits<double>::infinity(), upper );  
   } 
   /// set upper/lower limited variable (override if minimizer supports them )
   virtual bool SetLimitedVariable(unsigned int ivar , const std::string & name , double val , double step , double /* lower */, double /* upper */) { 
      return SetVariable(ivar, name, val, step );  
   }
   /// set fixed variable (override if minimizer supports them )
   virtual bool SetFixedVariable(unsigned int ivar , const std::string & name , double val ) { 
      return SetLimitedVariable(ivar, name, val, 0., val, val); 
   }

   /// method to perform the minimization
   virtual  bool Minimize() = 0; 

   /// return minimum function value
   virtual double MinValue() const = 0; 

   /// return expected distance reached from the minimum
   virtual double Edm() const = 0; 

   /// return  pointer to X values at the minimum 
   virtual const double *  X() const = 0; 

   /// return pointer to gradient values at the minimum 
   virtual const double *  MinGradient() const = 0;  

   /// number of function calls to reach the minimum 
   virtual unsigned int NCalls() const = 0;    

   /// this is <= Function().NDim() which is the total 
   /// number of variables (free+ constrained ones) 
   virtual unsigned int NDim() const = 0;  

   /// number of free variables (real dimension of the problem) 
   /// this is <= Function().NDim() which is the total 
   virtual unsigned int NFree() const = 0;  

   /// minimizer provides error and error matrix
   virtual bool ProvidesError() const = 0; 

   /// return errors at the minimum 
   virtual const double * Errors() const = 0;

   /** return covariance matrices elements 
       if the variable is fixed the matrix is zero
       The ordering of the variables is the same as in errors
   */ 
   virtual double CovMatrix(unsigned int i, unsigned int j) const = 0;  

   /**
      return correlation coefficient between variable i and j.
      If the variable is fixed or const the return value is zero
    */
   virtual double Correlation(unsigned int i, unsigned int j ) const { 
      double tmp = CovMatrix(i,i) * CovMatrix(j,j);
      return ( tmp < 0) ? 0 : CovMatrix(i,j) / std::sqrt( tmp );  
   }

   /**
      return global correlation coefficient for variable i
      This is a number between zero and one which gives 
      the correlation between the i-th parameter  and that linear combination of all 
      other parameters which is most strongly correlated with i.
      Minimizer must overload method if implemented 
    */
   virtual double GlobalCC(unsigned int ) const { return -1; }

   /// minos error for variable i, return false if Minos failed or not supported 
   virtual bool GetMinosError(unsigned int /* i */, double & errLow, double & errUp) { 
      errLow = 0; errUp = 0; 
      return false; 
   }  

   /// return reference to the objective function
   ///virtual const ROOT::Math::IGenFunction & Function() const = 0; 


   /** minimizer configuration parameters **/

   /// set print level
   int PrintLevel() const { return fDebug; }

   ///  max number of function calls
   unsigned int MaxFunctionCalls() { return fMaxCalls; } 

   /// max iterations
   unsigned int MaxIterations() { return fMaxIter; } 

   /// absolute tolerance 
   double Tolerance() const { return  fTol; }

   /// strategy 
   int Strategy() const { return fStrategy; }

   /// status code of minimizer 
   int Status() const { return fStatus; } 

   /// return the statistical scale used for calculate the error
   /// is typically 1 for Chi2 and 0.5 for likelihood minimization
   double ErrorUp() const { return fUp; } 

   ///return true if Minimizer has performed a detailed error validation (e.g. run Hesse for Minuit)
   bool IsValidError() const { return fValidError; }

   /// set print level
   void SetPrintLevel(int level) { fDebug = level; }

   ///set maximum of function calls 
   void SetMaxFunctionCalls(unsigned int maxfcn) { if (maxfcn > 0) fMaxCalls = maxfcn; }

   /// set maximum iterations (one iteration can have many function calls) 
   void SetMaxIterations(unsigned int maxiter) { if (maxiter > 0) fMaxIter = maxiter; } 

   /// set the tolerance
   void SetTolerance(double tol) { fTol = tol; }

   ///set the strategy 
   void SetStrategy(int strategyLevel) { fStrategy = strategyLevel; }  

   /// set scale for calculating the errors
   void SetErrorUp(double up) { fUp = up; }

   /// flag to check if minimizer needs to perform accurate error analysis (e.g. run Hesse for Minuit)
   void SetValidError(bool on) { fValidError = on; } 




protected: 


//private: 


   // keep protected to be accessible by the derived classes 
 

   bool fValidError;            // flag to control if errors have been validated (Hesse has been run in case of Minuit)
   int fDebug;                  // print level
   int fStrategy;               // minimizer strategy
   int fStatus;                 // status of minimizer    
   unsigned int fMaxCalls;      // max number of funciton calls 
   unsigned int fMaxIter;       // max number or iterations used to find the minimum
   double fTol;                 // tolerance (absolute)
   double fUp;                  // error scale 

}; 

   } // end namespace Math

} // end namespace ROOT


#endif /* ROOT_Math_Minimizer */

Subversion Admin
ViewVC Help
Powered by ViewVC 1.0.9