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Revision 44630 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jun 8 14:27:16 2012 UTC (2 years, 7 months ago) by moneta
File length: 4194 byte(s)
Diff to previous 44507
fix a bug in generating events from expected simultaneous pdf reported 
by Max Baak.  
 When using pdf.generate for simultaneous extended pdf with the binned option the number of expected events used to generate was truncated to an integer instead of being used as a double. 
This bug caused also to have also the case of zero events generated removed. 

A simila rounding was happening also  in case of pdf.generateBinned for extended single (not simultaneous) pdf. 

See also the roostats-development mailing list  
https://groups.cern.ch/group/roostats-development/Lists/Archive/Flat.aspx?RootFolder=%2Fgroup%2Froostats%2Ddevelopment%2FLists%2FArchive%2FBug%20in%20toy%20generation%20%28i%2Ee%2E%20limit%20setting%29%20of%20composite%20datasets%20with%20zero%20weight&FolderCTID=0x0120020052D20A0AA6FE91449D78373A416E9071

Revision 44507 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 4 12:30:41 2012 UTC (2 years, 7 months ago) by axel
File length: 4191 byte(s)
Diff to previous 42233
Remove
  using namespace std;
from Riostream.h, which has huge consequences for all of ROOT.
Riostream.h is now a simple wrapper for fstream, iostream, iomanip for backward compatibility; Riosfwd.h simply wraps iosfwd.

Because of templates and their inline functions, Riostream.h needed to be included in headers, too (e.g. TParameter.h), which violated the assumption that Riostream.h is not exposing its using namespace std to headers.
ROOT now requires R__ANSISTREAM, R__SSTREAM, which does not change the set of supported compilers.

Without "using namespace std", several identifiers are now prefixed by std::; e.g. roofit/* source files now have a using namespace std to keep their coding style.
TFile::MakeProject() now generates "using namespace std" to convert the CINT-style class names into C++ ones.

Revision 42233 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Nov 24 23:35:45 2011 UTC (3 years, 2 months ago) by wouter
File length: 4166 byte(s)
Diff to previous 41676
  o PiecewiseInterpolation, RooProdPdf, RooRealSumPdf, RooProduct, RooAddPdf, 
    RooAddition, RooHistPdf, RooHistFunc
 
    -  Implement isBinnedDistribution


  o RooSimSplitGenContext

    - New implementation of RooAbsGenContext for simultaneous pdf.
      The difference with the existing RooSimGenContext is that
      the logic is implemented at the generate() level rather than
      the generateEvent() level, which allows to perform mixed
      binned/unnbinned generation


  o RooBinnedGenContext

    - New implementation of RooAbsGenContext that performs binned
      generation, with an unbinned weighted dataset as output.
      This new context implements the algorithm of 
      the now deprecated method RooAbsPdf::generatedWeightedUnbinned()


  o RooSimultaneous

    - Implement method autoGenContext() that selects a split context
      can case (partially) binned generation is requested

    - Deprecate generateMixed() - now absorbed in generate() 
  

  o RooAbsGenContext

    - Make generate() virtual

    - Implement processing of extend mode here too


  o RooCompositeDataStore

    - Fix compiler shadowing warnings


  o RooAbsPdf

    - Add method binnedGenContext() to return a generator context
      for binned generation

    - Add method autoGenContex() that can return either a binned
      or unbinned context depending on the input and circumstances

    - Add support for ExpectedData(),GenBinned(),AllBinned() and AutoBinned()
      in generate()

    - Deprecate generateWeightedUnbinned() - now absorbed in generate()


  o RooLinkedList, RooLinkedListElem

    - Adjust memory management of chain elements to avoid slow heap growth 

   
  o RooGlobalFunc

    - Add GenBinned(),AllBinned() and AutoBinned()


  o Module.mk

    - Add RooSimSplitGenContext, RooBinnedGenContext

Revision 41676 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Nov 1 15:44:30 2011 UTC (3 years, 2 months ago) by wouter
File length: 4044 byte(s)
Diff to previous 39400
   *** Miscellaneous speed improvements ***
  
    o PiecewiseInterpolation

      - Import changes from Max baak (new interpolation options)

      - Deploy fast iterators


    o RooGaussian

      - Bug fix in analytical integral over 'mean' parameter (Lorenzo Moneta)


    o RooBernstein

      - Deploy fast iterators


    o RooProdPdf

      - Reorganize code for improved speed


    o RooDataHist

      - Add support for vector-based data storage


    o RooGenContext

      - Improve generation speed by putting internal pdf clone to ADirty mode


    o RooRealBinding

      - Minimize number of calls to min() and max() for efficiency reasons


    o RooAbsRealLValue

      - In randomize() Minimize number of calls to min() and max() for efficiency reasons


    o RooDataSet

      - Make addFast() even faster by disable state propagation


    o RooAbsGenContext

      - Disable state propagation in output dataset for efficiency reasons
      - Call initGenerator() only on the first generation sequence

 
    o RooVectorDataStore

      - Add support for native vs current buffers, to support the functioning
        of addColumn(s)() and cacheArgs() when the datastore is attached
        to a pdf in RooAbsOptTestStatistics

   
    o RooAbsCategoryLValue

      - Support change in RooAbsCategory to operate nominally by index rather than by label


    o RooXYChi2Var

      - Change code to support new pdf/data attachment scheme in RooAbsOptTestStatistics
        where only the store buffers are reattached and the variable objects themselves


    o RooFFTConvPdf

      - Bug fix in getActualObservables() - functionality of setCacheObs() is now restored


    o RooAbsReal

      - Small adjustments in getVal() to make it faster in most cases


    o RooAbsCollection

      - Add datamember to keep track contents is exclusively RooRealVars. For those that
        do implement a faster version of assignFast()


    o RooAbsData

      - Add methods attachBuffers() and resetBuffers() - forwarded to datastore - that
        facilite new 'fast-attach' methods used in RooAbsOptTestStatistic


    o RooCompositeDataStore

      - Fix copy constructors so that they clone and own the subsidiary datasets

      - Operate index by value rather than by string label for efficiency reasons


    o RooRealVar

      - Bug fix in attachToVStore() to properly handle RRVs with StoreError tags


    o RooAbsPdf

      - Adjustments in getVal() to make it faster for most cases
      - Modify generate(GenSpec*) to initialize specInit flag that
        triggers one-time call of initGenerator()
      - Modify generate() to not repeatedly call initGenerator() for the same gencontext

 
    o RooAbsArg

      - Deploy fast iterators in more places
      - Add various new inline methods performing multiple ops (e.g retrieving and
        clearing one or more dirty flags) for improbed RooAbsReal/RooAbsPdf::getVal()
        operations
   

    o RooBanner

      - Increment version tag to 3.48


    o RooRealIntegral

      - Add overloaded getVal() method that also checks for shapeDirty flag,
        which was removed from RooAbsReal::getVal() as it is not needed for
        any class other than RooRealIntegral


    o RooAddGenContext

      - Disable state propagation in output dataset for efficiency reasons
      - Replace ROOT container classes with STL versions for efficiency reasons


    o RooMultiCatIter

      - Adjust code to new RooCatType behaviour that by default only tracks the
        integer representation of type


    o RooProdGenContext

      - Replace ROOT container classes with STL versions for efficiency reasons


    o RooTreeDataStore

      - Adjust code so that it works with the new fast-attach mechanism used
        in RooAbsOptTestStatistic


    o RooRealProxy

      - In lvptr() remove explicit check for lvalue


    o RooSimGenContext

      - Disable state propagation in output dataset for efficiency reasons
      - Replace ROOT container classes with STL versions for efficiency reasons
      - In createDataSet() create a prototype dataset in the first call, and
        clone that for subsequent calls rather than calling the expensive named
        argument constructor each time


    o RooTrace

      - Add (dummy) method callgrind_zero() and callgrind_dump() as hook functions
        to facilitate improved callgrind profiling


    o RooAbsCategory

      - Adjust class so that it works with the integer representation of types only
        and lookup associated string label on the fly, whenever it is requested


    o RooFormular

      - Eliminate overloaded getVal() as its functionality is now provided in 
        RooAbsReal::getVal()


    o RooAbsOptTestStatistic

      - Implement new fast-attach mechanisms for pdf and datasets: only readjust the
        buffer pointers of the dataset to the pdf observables, rather than reattaching
        the pdf to the dataset observables. This results in a _much_ faster 
        operation of setData() and no longer entangles the test statistics with observables
        of datasets that may be deleted during the lifetime of the test statistic

 
    o RooSimultaneous
 
       - Overload fillDataHist() with new version with correct normalization (from Scott Snyder)


    o RooCategory

       - Adjust getLabel() so that it retries labels associated with the current index on the fly


    o RooCatType

       - Make label contents 'transient', i.e. it is not copied on assignment for faster 
         category operations. RooAbsCategory will load the associated labels on demand from now on.

Revision 39400 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu May 26 12:38:07 2011 UTC (3 years, 8 months ago) by wouter
File length: 4020 byte(s)
Diff to previous 34064
  
  o RooDataSet

    - Add support is ctor for new argument OwnLinked() that will cause
      dataset to take ownership of linked component datasets


  o RooAbsGenContext

     - Add new virtual method createDataSet() to create the output dataset
       of the generation exercise

     - In generate() use createDataSet() instead of creating a RooDataSet directly


  o RooAbsData

     - Add concept of owned component datasets and add interface method addOwnedComponent()


  o RooGlobalFunc

     - Add named argument OwnLinked()


  o RooSimGenContext

     - Overload method createDataSet(). For cases where the component of the RooSimultaneous
       implement different subsets of the total set of observables, create and empty dataset
       tailored to the observables of each component and join these in a composite dataset
       that owns the components. If all

Revision 34064 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jun 22 15:05:19 2010 UTC (4 years, 7 months ago) by wouter
File length: 3922 byte(s)
Diff to previous 28259
 Import roofit/roofit(core) changes from dev/roostats branch to trunk 

=== r34062 ===

   o RooProdPdf

     - Fix compilation error on Windows

     - Fix memory leak

     - Fix some shadowing problems


   o RooDataHist

     - Fix memory leak


   o RooFactoryWSTool

     - Add syntax checker routine to factory front-end. At present
       this counts only of all pairs of (),[],{} match.

     - Add factory syntax 'set::name(a,b,c)' as factory syntax for
       RooWorkspace::defineSet("name","a,b,c") ;


   o RooAddPdf 

     - Fix memory leak

  
   o RooAbsNumGenerator, RooAcceptReject, RooFoamGenerator

     - Fix uninitialized pointer problem spotted by valgrind


   o RooRealMPFE

     - Fix gcc 4.4 warnings by checking return values of all read(),write()
       and pipe() calls.


   o RooAbsPdf

     - Fix variable shadowing issue


   o RooRealIntegral

     - Fix memory leak
      

   o RooTreeDataStore

     - Fix memory leak


   o RooSimultaneous

     - Fix variable shadowing issue


   o RooGlobalFunc, LinkDef2

     - Include fix from Kyle/Axel to solve include guard issue in macros
       for namespace RooFit

=== r34020 ===

Update to RooRealSumPdf where normalization had memory leak


=== r33961 ===

 o RooAbsReal

   - Add new method setEvalErrorLoggingMode() that takes three options
     PrintErrors (default), CountErrors (new) and CollectErrors (supports
     structured printing during minimization

 o RooRealMPFE, RooMinimizerFCN, RooMinimizer, RooMinuit

   - Follow changes in RooAbsReal


 o RooAbsPdf

   - Make getLogVal() return log(0) when probability is zero, rather than zero,
     to support operation of (non-log) likelihood functions


=== r33945 ===

 o RooNumRunningInt, RooCachedPdf, RooCachedReal

   - Use aggregateCacheUniqueSuffix() advertised by content to 
     distinguish objects with identical structure that have
     different non-parametric content (such as likelihood functions)


 o RooAbsCachedPdf, RooAbsCachedReal

   - Allow addition of additional suffix to name of object cached
     in expensive object store

 o RooAbsReal

   - Introduce virtual function cacheUniqueSuffix() that allow function
     objects that have non-parametric content that can cause two instance
     of an object with the same parameter to behave differently (e.g. likelihoods that
     have different datasets but the same pdf) to advertise a string suffix
     that can be attached to the index name in the expensive object cache to
     distinguish different instances

   - Introduct method aggregateCacheUniqueSuffix() that concatenates all suffixes
     produced by any branch node into a single string

 o RooAbsOptTestStatistic

   - Advertise dataset pointer as unique cache suffix


o RooProdPdf

   - Large scale adjustment to code to be able to handle pdfs where
     the normalization range of its observables is defined by
     multiple ranges rather than a single range

 o RooMsgService

   - Add concept of debug workspace and debug code to facilitate
     debugging of complex problems


 o RooGenContext

   - Force use of Accept/Reject sampler for problems with observables where
     the range depends on other observables as Foam cannot handle these

 o RooDataSet

   - Bug fix in handling of weights in append() operation


 o RooAbsGenContext

   - Add support for handling of explicit normalization range(s)


 o RooAbsReal

   - Bug fix in createIntegral(), avoid use of strtok() due to possible recursive use


 o RooAddPdf

   - Large scale adjustment to code to be able to handle pdfs where
     the normalization range of its observables is defined by
     multiple ranges rather than a single range

 o RooAbsPdf

   - Add support for definition of multiple normalization ranges, with setNormRange()
     as user front end


 o RooAbsArg

   - Fix bug in link state management: a state change to ADirty must be propagated to
     all clients.

   - Add maximum level argument to printComponentTree()


 o RooRealIntegral

   - Fine tuning of debug-level print messages

   - Fix memory leak


 o RooAddGenContext

   - Add support for handling of multiple normalization ranges


 o RooRangeBoolean

   - New RooAbsReal implementation that returns 1 or 0, depending on another observable
     having a value in a predefined range


 o RooAbsIntegrator

   - Fine tuning of debug-level printouts


 o RooTreeDataStore

   - Multiple bug fixes in handling of weighted data


 o RooAbsOptTestStatistic

   - Small changes to support operation with multiple normalization ranges


 o RooArgSet

   - Add utility method isInRange() that is forwarded to content


 o RooGenProdProj

   - Add new operation mode that does not factorize, which is needed for certain cases
     with multiple n


=== r33943 ===

o RooProdPdf

   - Large scale adjustment to code to be able to handle pdfs where
     the normalization range of its observables is defined by
     multiple ranges rather than a single range

 o RooMsgService

   - Add concept of debug workspace and debug code to facilitate
     debugging of complex problems


 o RooGenContext

   - Force use of Accept/Reject sampler for problems with observables where
     the range depends on other observables as Foam cannot handle these

 o RooDataSet

   - Bug fix in handling of weights in append() operation


 o RooAbsGenContext

   - Add support for handling of explicit normalization range(s)


 o RooAbsReal

   - Bug fix in createIntegral(), avoid use of strtok() due to possible recursive use


 o RooAddPdf

   - Large scale adjustment to code to be able to handle pdfs where
     the normalization range of its observables is defined by
     multiple ranges rather than a single range

 o RooAbsPdf

   - Add support for definition of multiple normalization ranges, with setNormRange()
     as user front end


 o RooAbsArg

   - Fix bug in link state management: a state change to ADirty must be propagated to
     all clients.

   - Add maximum level argument to printComponentTree()


 o RooRealIntegral

   - Fine tuning of debug-level print messages

   - Fix memory leak


 o RooAddGenContext

   - Add support for handling of multiple normalization ranges


 o RooRangeBoolean

   - New RooAbsReal implementation that returns 1 or 0, depending on another observable
     having a value in a predefined range


 o RooAbsIntegrator

   - Fine tuning of debug-level printouts


 o RooTreeDataStore

   - Multiple bug fixes in handling of weighted data


 o RooAbsOptTestStatistic

   - Small changes to support operation with multiple normalization ranges


 o RooArgSet

   - Add utility method isInRange() that is forwarded to content


 o RooGenProdProj

   - Add new operation mode that does not factorize, which is needed for certain cases
     with multiple normalization ranges

=== r33758, r33720 ===


 o RooPoisson

   - Fixes in internal generation code


 o RooLogNormal, RooGamma, LinkDef1

   - New classes contributed by Gregory Schott

Revision 28259 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Apr 16 16:21:16 2009 UTC (5 years, 9 months ago) by wouter
File length: 3860 byte(s)
Diff to previous 24247
  Update roofit/roofitcore and roofit/roofit with
  RooFit v2.98 code from dev/roostats branch

Revision 24247 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jun 12 14:54:32 2008 UTC (6 years, 7 months ago) by wouter
File length: 3800 byte(s)
Diff to previous 23538
   o RooAbsSelfCachedPdf RooAbsCacheElement RooAbsProxy RooAbsSelfCachedReal RooAbsRealLValue 
     RooAbsCachedReal RooAbsGenContext RooAbsCategoryLValue RooAbsAnaConvPdf RooAbsReal 
     RooAbsCollection RooAICRegistry RooAbsCachedPdf RooAbsTestStatistic RooAbsData RooAbsLValue 
     RooAbsFunc RooAbsPdf RooAbsArg RooAbsBinning Roo1DTable RooEffProd RooAbsRootFinder RooAbsHiddenReal 
     RooAbsString RooAbsIntegrator RooMinuit RooAbsCache RooAbsCategory RooAbsOptTestStatistic RooAbsMCStudyModule

     - Upgrade inline documention: make sure that every member function has some descriptive comments, every
       data member has a descriptive comment, make sure that each class has a description.

     - Fix class description header so that it is correctly identified by THtml

     - Remove a couple of obsolete member function

Revision 23538 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Apr 24 21:02:00 2008 UTC (6 years, 9 months ago) by wouter
File length: 3195 byte(s)
Diff to previous 23134
Import changes from development branch

==== Date: Wed Feb 20 22:33:28 2008 =====

   o RooRealSumPdf

     - Do _not_ use normalization of RooAbsPdf input components
       in numerator of RooRealSumPdf expression since it is 
       already explicitly occurring in denominator of RooRealSumPdf.
       (Fixes wrong normalization reported by Tristan)


   o RooObjCacheManager

     - Register owner of cache with each cache elememt to
       facilitate callbacks


   o RooAbsCacheElement

     - Add storage for pointer to owner of cache and
       supply setOwner() function


   o RooAbsPdf

     - Use RooObjCacheManager callback mechanism to zero
       'last used normalization' pointer in RooAbsPdf
       when the cache-owned object pointed is about
       to be deleted. 


   o RooAbsArg

     - Make crc32 function static


   o RooWorkspace

     - Add CodeRepo nested class that allows to store C++ code
       of RooAbsArg derived classes that are not in ROOT distribution
       but are contained in workspace. When reading any missing
       class, code is compiled on the fly allowing for transparent
       reading of workspace object from file. Code is found in
       location pointed to from TClass objects. Additional search
       path for declaration and implementation files can be provided
       to be able to handle non-trivial cases.

     - Add WSDir nested class that represents information contained
       in workspace as read-only TDirectory for easy interactive use. 
       Directory representation is created using makeDir() member function.


  o LinkDef3

     - Add nested classes in RooWorkspace

===== Date: Wed Mar 26 23:04:26 2008 =====

   o RooProdPdf

     - Fix typo in ctor documentaion

     - Improve error message in expectedEvents() when no extendable p.d.f.s are found

     - Implement getConstraints() function to retrieve constraint p.d.f terms from product
       expression given set of observables and set of parameters to be constrained.


   o RooMsgService

     - Add PROGRESS message level between INFO and WARNING

     - Add globalKill level for messages to be able to quickly eliminate all messages below
       a given level without interfering with the stream structore of RooMsgService


   o RooPrintable

     - Implement new printing interface with more details control over items printed trhough contents enum
       (multiple ORable options) and style of printing (inline, single line, (verbose) multiline) with style 
       enum (exclusive options). 

     - Introduce generic virtual functions for printing of name,title,value,arguments,
       and extras of each object. 

     - Each class can overload the default contents used for all printing
       uses (inline,verbose,standard) etc as well as the default printing style invoked by Print()


   o RooPlot,RooGenContext, RooAbsRealLValue,RooDataSet,RooNameSet,RooCustomizer, RooAbsGenContext, RooAddModel,
     RooFitResult,RooCurve,RooAbsAnaConv,RooHist,RooAbsReal,RooAbsCollection,RooAddPdf,RooTable,RooAbsData,
     RooMappedCategory,RooFormula,RooFormulaVar,RooCatType,RooRealVar,RooAbsArg,RooAbsPdf,RooPlotable,RooRealIntegral,
     RooAbsBinning,Roo1DTable,RooAddGenContext,RooGenericPdf,RooResolutionMode,RooAbsHiddenReal,RooMultiCategory,
     RooAbsString,RooSetProxy,RooProdGenContext,RooConvGenContext,RooGenCategory,RooGrid,RooSimGenContext,
     RooThresholdCategory,RooAcceptReject,RooSuperCategory,RooEllipse,RooNumIntConfig,RooAbsCategory,RooListProxy,
     RooLinearVar,RooTreeData,RooTreeData

     - Update to new RooPrintable interface


   o RooGenContext,RooAbsGenContext,RooAddGenContext,RooProdGenContext,RooConvGenContext,RooSimGenContext

     - Implement attach() function to simplify management of changing parameters during lifetime of context


   o RooAbsRealLValue

     - Eliminate inFitRange() warning message as it is gives too many false warnings when used with
       parameterized ranges


   o RooCustomizer

     - Make owning of contents optional to simplify release of created components
     

   o RooAbsReal

     - Implement new evaluation error logging mechanism. Rather than passing zero p.d.f values, push error message with
       details on a static stack (if logging is enabled by e.g. RooMinuit). 

     - Augment functionality of createIntegral: explicitly allow integration over ranges with bounds parameterized in 
       in terms of other integrated observables. Integrals of this type are automatically recognized and cast
       as recursive integrals in case of >1-D integrals to integrate over requested phase space. 

     - Add createIntObj() helper function for above functionaliy.

     - Eliminate a lot of commented out debug code from createPlotProjection()

     - Modify fillHistogram(): when plot observables are cloned, explicitly interconnect clones again to facilitate
       proper plotting of N-D integrals with entangled parameterized ranges

     - Add ScaleFactor() argument to fillHistogram to control use of histogram density correction scale factor in Z-scale
       of filled histogram


   o RooProduction

     - Fix bug for persistence


   o RooRealMPFE

     - Extend client/server protocol with message to retrieve RooAbsReal evaluation error log from server side and
       merge with error log on client side


   o RooRealVar

     - Introduced concept of non-shared alternative binnings(ranges) required to accommodate RooParamBinning ranges
       that cannot be shared across instances because of their client/server connection to other objects in p.d.f
       expression trees. Modify setBinning to automatically recognize non-shareable binnings and divert those to
       non-shared alternative binning container.

     - Add setRange([const char*,] RooAbsReal&,RooAbsReal&) methods to simplify creation of parameterized ranges.


   o RooAbsArg

     - Introduce concept of owned components with addOwnedComponents() interface to be able to make any RooAbsArg
       object own any number of others. This can be used to simplify the memory management of object trees 

     - Introduce prohibitServerRedirect mode that will trigger fatal assert if any server redirect is attempted
       to thus configured object. Useful as debugging tool to track faulty copy constructors that leave clone
       object tree unintentionally connected to the original object tree.

     - Migrate fixed--name-field management tool from RooAbsReal to RooAbsArg. Used to accomplish regular
       formatting in RooAbsCollection::printStream.

     - Add concept of transient boolean attributes that are not tranferred on copy construction. Mostly useful
       for debugging.

     - Extend leafNodeServerList and treeNodeServerList to distinguish to types of leaf-nodes: strict leaf modes
       in the sense of the client-server tree structure and 'physical' leaf nodes that do not recurse into
       nodes that have isDerived()==kFalse. The latter corresponds to the original concept of leaf nodes / variables,
       which the former mode, a new addition, explicitly exposes any shape servers contained in parameterized
       ranges of variables.

     - Fix logic error in recursiveServerRedirect: do not recurse into nodes that are in the replacement list themselves.

     - Fix bug in printCompactTree(): value/shape clients were not always properly indicated.

     - Add getAllConstraints() method that finds all RooProdPdfs in expression trees and harvest constraints from all
       of these from the getConstraint() method


   o RooAbsPdf

     - Implement new evaluation error logging mechanism for negative p.d.f values and zero normalization integrals

     - Add Constrain(const RooArgSet& pars) and ExternalConstraints(const RooArgSet& pdfs) arguments to fitTo() method.
       The Constrain() method retrieves any constraints p.d.f. on parameters multiplied in any RooProdPdf in the normal 
       p.d.f expression and adds those to the likelihood that is minimized. Only constraints on the listed parameters
       will be picked up. Multiple constraints per parameter may exist. The ExternalConstrains() argument implements
       similar functionality except that provided external constraint p.d.f.s are added rather than internal constraints.

     - Fix potentially fatal bug in print statement in getContext()

     - Add new method createCdf() to create a cumulative distribution function from given p.d.f. Given a set of observables x, 
       the returned c.d.f is implemented in terms of a RooRealIntegral of p.d.f(x') over a parameterized range from [ 0 - x ].


   o Roo1DIntegrator

     - Improve error message


   o RooRealIntegral

     - Fix bug in calculation of shape dependencies on observables.

     - Add handling of dependencies of integral value on values of objects representing parameterized ranges of
       integrated observables.     


   o RooMCStudy

      - Add Constrain(const RooArgSet& pars) and ExternalConstraints(const RooArgSet& pdfs) arguments to constructor.
        In addition to passing these arguments to the fitTo() call of the fit stage, modify event generation as
        follows: instead of sampling events from 'static' generator p.d.f, sample value of constrained parameters
        from joint constraints p.d.f and sample observables at those parameter settings. Save the generator parameters
        for each toy as these change per toy. Change the pull calculation such that it uses the per-event truth values
        rather than the per-study truth value if constraints are used.


   o RooAddition

     - Fix bug in evaluate() related to persistence


   o RooMinuit

     - Enable/disable new evaluation error logging mechanism prior to and just after each MINUIT call.

     - Print logged error messages, if any, in glue function


   o RooProjectedPdf

     - Fix important bug: normalization set should always include integration set for each configuration


   o RooGlobalFunc

     - Add definition of Scaling(),Constrain() and ExternalConstraints() helper functions 


   o RooUniformBinning
  
     - Remove dedicated print function as it output is identical to that of the generic print function in RooAbsBinningx

  
   o RooAbsBinning

     - Add virtual methods isParameterized(),lowBound() and highBound() to be to detect and analyze parameterized binnings
       through abstract interface

     - Add isShareable() method to be able to separate shareable and non-shareable binnings in RooRealVar.

     - Add insertHook() and removeHook() function to allow connection of possible proxies present in binning to
       owning RooAbsArg.


   o RooWorkspace

     - Improve code import facility by introducing a class->file mapping step in the CodeStore to correctly handle cases where 
       multiple classes are defined in a single file.

     - Add check that TClass interface actually yields file names.

     - Only require default constructor to be present for non-abstract classes. It should be there for abstract classes as
       well but current TClass::HasDefaultConstructor() method will not tell us.

   o RooTreeData

     - Improve renameVariable() method to not only rename the RooAbsArg branch buffer but also any TTree branches involved as well.
       While the tree branch names are generally invisible to the user, having branch names that are different from branch buffer names
       may cause branch naming conflicts in merge() that are not detectable as branch buffer naming conflicts.


   o RooParamBinning

     - New class implementing binning with low and high points defined by external RooAbsReal objects 


   o RooConstrainSum

     - Helper class for RooAbsPdf to represent likelihood of collection of constraint p.d.f.s.


==== Date: Fri Mar 28 10:04:57 2008 =====

   o RooRecursiveFraction

     - Helper function for RooAddPdf that calculates recursive fraction 
       f1*(1-f2)*(1-f3) from a given set of plain fractions


   o RooAddPdf

     - Add flag to ctor to optionally interpret fractions as recursive fractions.
       If activated it constructs the recursive fractions using RooRecursiveFraction
       from the original fractions


   o LinkDef3.h, Module.mk

     - Add new class RooRecursiveFraction

==== Date: Tue Apr  1 22:42:19 2008 ====

   o RooDataWeightedAverage

     - New implementation of RooAbsOptTestStatistics that calculates data weighted
       average of any RooAbsReal. This class serves as successor of RooDataProjBinding
       that no longer complies with new optimization scheme. 

   o RooRealBinding

     - Implement name() function for more useful error messaging in integration


   o RooChi2Var,RooNLLVar

     - Follow changes in base class


   o RooAbsReal

     - In plotOn() support binning flag in ProjWData(). Reimplement data-weighted projections
       using new RooDataWeightedAverage class instead of RooDataProjBinding which does not
       work with new generic function optimization scheme. 

     - Add support for NumCPU() argument
       in plotOn() to facilitate multi-processor calculation of projections. Extend NumCPU()
       argument to pass interleaving option in MP splitting mode of RooAbsTestStatistic

     - Move fixAddCoefNormalization() and fixAddCoefRange() from RooAbsPdf to RooAbsReal
  

   o RooAbsTestStatistic

     - Generalize functionality: allow RooAbsReals as input arguments instead of RooAbsPdfs only.
       Also add virtual globalNormalization() function that allows to apply a global normalization
       term after combinedValue() operation to facilitate functionality of RooDataWeightedAverage.

     - Add option to split data in multiprocessor mode in interleave mode instead of in bulk mode.
       Interleave mode is useful for parallel processing of histogram data where bulk partitions
       may not contain equal amount of non-zero data points leading to non-optimal load balancing
       between processes.


   o RooAbsPdf

     - Move fixAddCoefRange() and fixAddCoefNormalization to RooAbsReal to support operation of
       new generalized RooAbsTestStatistic
     

   o RooIntegrator1D

     - Use name() of RooAbsFunc() to clarify warning and error messages.


   o RooRealIntegral

     - Rename _operMode to _intOperMode to avoid shadowing of equally named data member in RooAbsArg

     - Fix bug in recursive printing


   o RooSetProxy

     - Fix bug in print()


   o RooGlobalFunc

     - Modify ProjWData() and NumCPU() helper functions with extra optional argument


   o RooAbsOptTestStatistic

     - Follow changes in RooAbsTestStatistic


   o RooAbsFunc

     - Add virtual name() function to facilitate better error and warning messages from integrators

=== Date: Tue Apr 15 17:57:32 2008 ===

   o RooMsgService

     - Add option to prefix streamed messages with process ID to simplify
       debugging of parallel fits


   o RooAbsProxy

     - Add optional addContents flag to print()


   o RooArgProxy, RooSetProxy, RooListProxy

     - Implement addContents flag in print()


   o RooAbsReal

     - Reimplement stack of logged error messages in terms of custom EvalError class. 
       A separate list<EvalError> is now kept for each object that reports an error.
       In addition to the given error message a record is constructed of the proxy
       values at the time of reporting. 
 
     - In printEvalErrors() add option to restrict number of reported items per node.
       If number is zero, only number of errors per node is shown (without details)


   o RooRealMPFE
 
     - Adjust ReportErrors message to changes EvalError implementation in RooAbsReal.
 
     - Make sure to synchronize remote error logging state with state of parent process
       before each evaluate()


   o RooRealVar

     - Move printing of error from printValue() to printExtras()


   o RooNLLVar

     - Fix bug in setting of interleave parameter of base class in certain ctors


   o RooAbsPdf

     - Improve passing of eval error messsages by make separate messages for NaN
       and negative values and including details in the error message

     - Add PrintEvalError(Int_t nErr) option to fitTo() to control new eval error
       message control system

     - Int printValue show both value (raw from evaluate()) as well as most recently
       used normalization value (if available)


   o RooMinuit

     - Interface new eval error logging control by adding setPrintEvalErrors(Int_t numEvalErrors)

=== Date: Thu Apr 24 15:11:59 2008 ===

   o Various classes

     - Fix all -Wshadow compiler warnings

=== Date: Thu Apr 24 16:32:21 2008 ===

   o RooMsgService

     - Use TSystem::GetPid() rather than getpid() for portability


   o RooAbsReal

     - Make nested class EvalError public


   o RooWorkspace

     - Fix windows compiler warning

========================================

   o RooBanner

     - Increment version tag to 2.40

Revision 23134 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Apr 11 07:53:39 2008 UTC (6 years, 9 months ago) by rdm
File length: 2780 byte(s)
Diff to previous 20879
move the following directories to "roofit":

roofitcore, roofit

Revision 20879 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 19 11:22:56 2007 UTC (7 years, 2 months ago) by rdm
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2780 byte(s)
Diff to previous 20161
Set property svn:eol-style LF on all source and Makefiles. This should avoid
problems with Win32 line endings ending up in the repository. All MS tools
support LF eols fine.

Revision 20161 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Oct 1 16:28:25 2007 UTC (7 years, 3 months ago) by wouter
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2780 byte(s)
Diff to previous 18735
   o RooAbsCache

    - New abstract base class for cache objects associated with RooAbsArgs.
      Caches register themselves with the owning RooAbsArg and propagate
      all necessary state changes and meta information to objects in the cache


   o RooCacheManager

    - Concrete template implementation of RooAbsCache with an interface
      and functionality styled after RooNormListManager. The template class
      provide no special handling for cache contents that includes RooAbsArg
      objects and does not forward hook calls. It is thus mostly intended
      to cache basic types indexed on a normalization/integration configuration


   o RooObjCacheManager

    - Class derived from RooCacheManager<RooAbsCacheElement> that implements
      all proper call forwarding and handling of state and other meta information
      to RooAbsArg objects embedded in the cache elements. To facilitate this
      functionality the RooAbsCacheElement defines a pure virtual method
      containedArgs() that must be implemented to expose its contents to
      the cache manager. The default behavior on a serverRedirect hook is
      to sterilize the cache. OperMode changes are not forwarded by default
      to the cache contents as cached objects do not necessarily have the
      same operation mode (e.g. if the cache contains an integral of its owner).
      Any calls to optimizeCacheMode(), printCompactTreeHook(), and findConstantNodes()
      are forwarded. Moreover, optimizeCacheMode() calls are remembered and
      any objects inserted in the cache after such a call was received will be
      optimized upon insertion in the cache

   o RooAbsCacheElement

    - Abstract base class for objects to be managed by RooObjCacheManager. Each
      object must in addition to its payload implement the containedArgs()
      member function that exposes the RooAbsArg object content to the manager
      for processing. The argument passed to containedArgs() indicates the use
      case for the returned list of objects, allowing the cache payload to
      return different lists depending upon use. This is for most applications
      not required.


   o RooAbsCachedPdf

    - Abstract base class derived from RooAbsPdf for p.d.f.s that implement 
      value caching in a grid over the entire domain of the observables. 
      The base class implements the overall caching logistics and manages
      the RooDataHists and RooHistPdfs that respresent the cached contents.
      Derived classes must inputBaseName() defined a unique name prefix for
      all cache objects, actualObservales() and actualParameters() to
      determined the actual observables and parameters given a set of 
      available observables and fillCacheObject() which should fill the
      RooDataHist cache for a given obs/params configuration with the
      p.d.fs values.


   o RooAbsSelfCachedPdf

    - Abstract base class derived from RooAbsCachedPdf that implements
      all of the required logistics in RooCachedPdf and only require
      derived classes from RooAbsSelfCachedPdf to implement evaluate().
      Any class derived from RooAbsPdf can thus be trivially switched
      to derived from RooAbsSelfCachedPdf and gain the caching functionality.
      

   o RooCachedPdf

    - Concrete class derived from RooAbsCachedPdf that implements
      the caching of an externally provided p.d.f in the constructor.


   o RooFFTConvPdf

    - Concrete class derived from RooAbsCachedPdf that implement generic
      numeric convolution of two input p.d.f.s using FFT technique
      and convolution theorem. Actual FFTs are calculated by FFTW
      through TVirtualFFT interface in ROOT. Present implementation only supports 
      convolution in one dimension, but this will be extended later
      as there are no fundamental limitations in RooAbsCachedPdf nor FFTW.
 

   o RooHistPdf

    - Moved from RooFit to RooFitCore because it is used by caching classes


   o RooProdPdf

     - Use new RooObjCacheManager to store partial objects

     - Fix memory leak (already patched in 15.0.14h)


   o RooDataHist

     - Use new RooCacheManager template to cache partial bin volumes

     - Add new set(),setAllWeights() method to update current weight and all weights
       respectively, for use in cached p.d.f.s

     - Add sliceIterator() that iterates over all bins in a lower dimensional 
       slice of the dataset


   o RooDataHistSliceIter

    - Class derived from TIterator that implements the iteration
      over a slice in a reduced number of dimensions in a RooDataHist


   o RooMsgService

     - Speed up processing of debug streams in cases where no debug streams are active

     - add macros series oocoutX and oocxcoutX that allow to associate message with
       a different object than *this

   o RooRealBinding

     - Interface new setValue method that allows value to be set outside default
       domain, but inside given alternate named range. For use in numeric integrator
       bindings


   o RooAbsRealLValue

     - Add new inRange() method with range name specifier to check against chosen
       range instead of default range


   o RooCmdConfig

     - Fix dangling return pointer problem in decodeStringOnTheFly() method


   o RooNameSet

     - Fix bug in refoll()


   o RooChi2Var, RooNLLVar

     - Add processing of AddCoefRange() named argument


   o RooConvCoefVar

     - Hold p.d.f in proxy without value/shape state propagation to obtain
       correct dependency of RooConvCoefVar through separate set proxy
       with parameters that do have state propagation

     - In getAnalyticalIntegral() ask for integration coefficient specific
       to coefficient (following interface change in RooAbsAnaConv)


   o RooEfficiency

     - Follow interface change in RooCategoryProxy


   o RooAbsAnaConvPdf

    - Use new RooObjCacheManager to hold normalization and coefficient representations

    - Extend getCoefAnalyticalIntegral() interface so that each coefficient
      can have a separate integration configuration

    - Modify makeCoefVars() such that it constructs the RooConvCoefVars with
      actual dependents for each coefficients, rather than inserting dependencies
      of any of the coefficients in each coefficient. This logic requires support
      from the implementation class that is interface through a new member function
      coefVars()


   o RooAbsReal 

    - Add Boolean data member treeVar that indicates is value buffer is also
      branch buffer of a tree. This information is already present in the RooAbsReal
      but is relatively expensive to retrieve and is always needed in the inner
      loop of data set operations. This extra member significantly speeds up operations

    - Remove superfluous _norm[] token in name returned by integralNameSuffix() if 
      no normalization set is supplied.

    - Add a fillDataHist() method that fills a given RooDataHist with a sampling
      of the given function. Added for support of caching p.d.f.s


    - Downgrading warning on non-dependent projection variables in plotOn() to
      a debug level message

    - Remove function optimizeDirty(),doConstOpt(),undoConstOpt(),findCacheableBranches()
      findUnusedDatasetVariables() and findRedundantCacheServers() as part of reorganization
      of optimization functionality.


   o RooAbsCollection

    - Use iterator semantics instead of vector semantics to process RooLinkedList
      contents in assignment operator

    - Add utility function contentsString() returning stl string with names
      of contents


   o RooAddPdf

    - Rewrite cache management using new RooObjCacheManager that holds projection
      integrals, range integrals and supplemental normalization lists


   o RooAbsOptGoodnessOfFit

    - Improve handling of normalization ranges and reference ranges for test statistics
      containing RooAddPdfs. New named argument in fitTo() and RooNllVar::ctor() pass
      reference range for fractions in RooAddPdf components that do not have an explicit
      fixed definition already. Name all normalization ranges explicitly after the
      subrange to which the're applied to avoid name clashes and conflicts if multiple
      normalization ranges are involved.

    - Rewrite informational messages through RooMsgService

    - Implement new constOptimizeTestStatistic() function that signals all test statistic
      components of a RooAbsArg expression tree to perform their constant term optimization

    - Implement new optimizeCaching() driver function that changes default lazy-evaluation-with-caching
      scheme to test statistic scheme where only parameters objects propagate state changes and
      where all components that depend directly or indirectly on observables have lazy evaluation
      disabled. Changes to p.d.f objects are delegated to RooAbsPdf::optimizeCacheMode(). Changes
      to dataset are delegated to RooAbsData::optimizeReadingWithCaching()

    - Implement new optimizeConstantTerms() function that is back end for constOptimizeTestStatistic
      implementation. 


  o RooAICRegistry, RooNormSetCache

    - Remove tracking of allocation cycles of RooArgSets as this scheme is superseded by
      memory pool mechanism for RooArgSet allocation


  o RooMappedCategory

    - Follow interface change in RooCategoryProxy.


  o RooRealMPFE

    - Follow reorganization of optimization functionality: implement new constOptimizeTestStatistic
      function for forwarding to slave processes.


  o RooRealVar

    - Add new setVal() function with range name to facilite setting of values that are outside
      default range, but inside specified alternate range. Needed for numeric integration and
      certain RooAddPdf coefficient projection.


  o RooAbsArg

    - Make state management functions public [is/set][Value/ShapeDirty](), setOperMode90
  
    - Add static _flipAClean boolean to support setACleanAdirty() static method.

    - Implement mechanism for registration of cache objects with base class RooAbsCache.
      Forward all calls to operModeHook(), redirectServersHook(), optimizeCacheMode()
      and printCompactTreeHook() to all caches for further processing
   
    - Define constOptimize() function and provide default implementation that forwards
      to all servers 

    - Implement optimizeCacheMode() function that puts expression tree in optimized
      caching for test-statistics operations (only cache/lazy evaluate nodes that
      do not (indirectly) depend on observables

    - Implement findConstantNodes() function that identifies all nodes that depend
      exclusively on constant observables and >0 observables that are eligible
      for precalculation and caching in test statistics operations by 
      RooAbsOptTestStatistic::optimizeConstantTerms()

    - Define constOptimizeTestStatistics that signal an expression tree that any
      embedded test statistic objects should perform their constant term optimization.
      Default implementation in RooAbsArg forwards call to all servers.


  o RooAbsPdf

    - Use new RooObjCacheManager to manage normalization integrals cache.

    - Process new SumCoefRange() option in fitTo() that sets the coeffient
      interpretation range for all embedded RooAddPdf objects of which
      the interpretation range was not explicitly set

    - Extend interface of fixAddCoefNormalizationSet(): add extra argument
      that controls if AddCoef normalization set are forcibly overruled
      for objects that already have an explicit range setting.

  
   o RooRealIntegral 

    - Add some informational messaging through RooMsgService, rewrite existing ones

    - Speed up numeric summations by precreating the involved RooSuperCategory
      in the ctor rather than in evaluate().

    - Fix bug in dependency insertion: explicitly require servers to be value
      server to avoid pulling in fake dependents.
    
    - Remove obsolete data members

    - Implement new setACleanADirty() function that atomically flips state of
      all AClean objects to ADirty for the duration of the integration step.
      Replaces the much more expensive prepareACleanFunc() that did this
      only for the objects involved.

    - Process factorizing terms in integral only if the list is not empty

    - Process Jacobian terms in integral only if the list is not empty


  o RooAddGenContext

   - Adapt to cache management chanches in RooAddPdf


  o RooNumIntFactory

   - Use STL classes for internal memory management


  o RooSetProxyy

   - Implement operator new() and operator() delete as required because
     RooArgSet implements them 


  o RooAbsGoodnessOfFit

   - Store and forward AddCoefRange information for embedded RooAddPdf objects

   - Implement constOptimizeTestStatistic() and forward to components


  o RooErrorVar

   - Follow inRange() interface change in RooAbsRealLValue


  o RooConvGenContext

    - Adapt code to make it work with both RooAbsAnaConv objects and
      the newly introduced RooFFTConvPdf


  o RooMinuit

    - Follow reorganization of optimization functionality


  o RooProjectedPdf

    - Store projection using new RooObjCacheManager


  o RooGlobalFunc

    - Add RooFit::SumCoefRange() named argument for RooAbsPdf::fitTo() 
      and RooNLLVar::ctor() and RooChi2Var::ctor()


  o RooClassFactory

    - Extend existing makePdf(),makeFunction and makeClass() functions
      to also accept RooAbsCategory arguments, to accept an optional string
      inserted as the return value expression inserted in the 
      evaluate() method of the class created, as well as as option string
      specifying one or more analytical integrations of the given function
      expression that will be advertised in the generated getAnalyticalIntegral()
      code and implemented in the generated analyticalIntegral() code

    - Add makeAndCompileFunction() and makeAndCompilePdf methods that
      generate the code and immediate compile it through ROOTs ACliC interface.
      These functions have a simpler interface because the list of arguments
      of the function to be created can be specified as a const RooArgSet&
      rather than a string with a list of names, thus making it easier
      for on-the-fly definition of compiled objects.

    - Add defineFunction() and definePdf() methods define and compile
      a function/pdf using the above functions and immediately instantiate
      an object of the given type passing the specified RooArgSet arguments
      to the constructor of the object. These functions make a compiled
      equivalent of RooFormulaVar based on the TFormula interpreter, i.e.

           RooAbsReal* f = new RooFormulaVar("f","D(1-2w)",RooArgSet(D,w)) ;

      becomes
       
           RooAbsReal* f = RooClassFactory::defineFunction("f","D(1-2w)",RooArgSet(D,w)) ;

   
  o RooAbsCategory

   - Add Boolean data member treeVar that indicates is value buffer is also
     branch buffer of a tree. This information is already present in the RooAbsReal
     but is relatively expensive to retrieve and is always needed in the inner
     loop of data set operations. This extra member significantly speeds up operations

   - Construct explit clean name for TBranch name if node is cached, equivalent
     to what is done in RooAbsReal. Needed because new constOptimizer can also
     cache RooAbsCategory objects


  o RooArgSet

   - Implement operator new() and operator delete() to implement memory pool scheme
     for RooArgSets. The goal of this implementation is to insure that two RooArgSet
     pointers are _never_ the same. This allows to RooNormSet cache manager to safely
     and quickly index integration and normalization configurations by evaluating
     the contents of a RooArgSet only the first time it sees it.


  o RooSimultaneous

   - Implement caching of partial integrals using new RooObjCacheManager

   - Following interface change in RooCategoryProxy ;


  o RooAbsData

   - Defined pure virtual methods optimizeReadingWithCache() and allClientsCached()


  o RooTreeData

   - Implement optimizeReadingWithCache() which determines given a p.d.f to be
     evaluated and a list of the nodes that are cached for it, which observables
     in the dataset are no longer required because they are either not an observable
     of the p.d.f, or they exclusively feed nodes that are cached. Reading of these
     observables is disabled through SetBranchStatus().
  
   - Move allClientsCached() utility function here from RooAbsReal.


  o RooCategoryProxy

   - Remove const char*() conversion operator in favor of a const char* label() method
     to remove possibly ambiguities in C++ math expressions involving category proxies.


  o LinkDef3.h

   - Add newly defined classes

Revision 18735 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri May 11 09:13:47 2007 UTC (7 years, 8 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2745 byte(s)
Diff to previous 12082
Change structure and names of files to that of ROOT CVS repository

Revision 12082 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 20 15:45:21 2005 UTC (9 years, 7 months ago) by wverkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2781 byte(s)
Diff to previous 11181
   o RooBanner

     - Update version number and copyright


   o Many files

     - Change <iostream> to "Riostream" to support compilation on platforms
       that do not have iostream classes in namespace std


   o RooAbsAnaConvPdf

     - Fix bug in range integration in getAnalyticalIntegralWN()

     - Change getCoefAnalyticalIntegral() signature to include rangeName in argument list


   o RooAbsArg

     - Add methods getObservables()/getParameters with const RooAbsData& argument


   o RooAbsPdf

     - Add support for Range(Double_t, Double_t) to specify fit range in fitTo()

     - Migrate getMaxVal()/maxVal() to RooAbsReal [Gerhard]

     - Fix bug in normalization of PDF projections over limited range: account for both
       fraction of data in range and fraction of projection in range (calculation of latter
       deferred to RooAbsReal::plotOn)


   o RooAbsReal

     - Migrate getMaxVal()/maxVal() from RooAbsReal [Gerhard]

     - Add code in plotOn() to support normalization of PDF projections plotted in limited range


   o RooAbsRealLValue, RooRealVar, RooErrorVar, RooLinearVar

     - Change getBinning() so that it only creates a new binning on the fly if a newly added boolean argument
       is true. Otherwise, return default binning


   o RooAdaptiveGaussKronrodIntegrator1D, RooGaussKronrodIntegrator1D

     - Declare prototypes for glue functions


   o RooArgSet

     - Fix readFromStream() and writeToStream() so that they are consistent with each other again for
       both regular and scientific notation mode.

     - Fix processing of include directives inside files in readFromFile()

     - Suppress warning messages about ignored lines in files unless verbose flag is set. Add verbosity control
       flag to readFromFile().


   o RooCategory

     - Support concept of ranges for categories as well through new member functions setRange(),addToRange(),
       clearRange(),hasRange(),isInRange() and isStateInRange(). Ranges are named TLists containing a non-owned
       subset of the possible RooCatTypes.


   o RooCategoryProxy

     - Make lvptr() const since it is.


   o RooConvCoefVar

     - Pass rangeName in getAnalyticalIntegral() to getCoefAnalyticalIntegral()


   o RooPlotable, RooCurve, RooHist, RooEllipse

     - Implement getFitRangeNEvt(Double_t, Double_t) that returns the number of events in the given sub-range.


   o RooDataHist

     - Fix bug using RooAbsData::plotOn --> using RooTreeData::plotOn


   o RooGlobalFunc

     - Add adjustNorm boolean argument to named argumentss Range()


   o RooMultiCatIter

     - Require that input is RooAbsCategoryLValue rather than RooAbsCategory.


   o RooPlot

     - Keep track of object that generated normalization event count in addition to event count itself.
       This allows to later on calculate an event count in a limited range through getFitRangeNEvt(Double_t, Double_t)


   o RooRealIntegral

     - Support ranges in category summation in integration code.


   o RooSimPdfBuilder

     - Fix bug in unitarity constraint split of parameter in partial build: adjust formula for remainder fraction
       so that it only uses the states that are actually built.

     - Improve error handling


   o RooSuperCategory

     -  Implement hasRange() and isInRange() functionality inherited from RooAbsRealLValue


   o RooClassFactory

     - New class that automatically generates code for PDFs and functions given a name and a list of argument names


   o RooEffProd

     - New class that implement product of PDF and efficiency function. Main feature is efficient implementation
       of event generator in case input PDF has 'smart' event generator

   o RooEffGenContext

     - Generator context associated with RooEffProd


   o Module.mk

     - ROOT make file module needed to compile RooFit as part of ROOT


   o make_roofit_installkit

     - Script to package RooFit source as ROOT module for compilation with ROOT system

Revision 11181 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Feb 25 14:23:04 2005 UTC (9 years, 10 months ago) by wverkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2752 byte(s)
Diff to previous 10638
   o All files

     - Update copyright notice from 2004 to 2005

Revision 10638 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 29 12:22:24 2004 UTC (10 years, 1 month ago) by wverkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2751 byte(s)
Diff to previous 8538
  o All Classes

    Migration from classic to standard IOstreams

Revision 8538 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Apr 5 22:44:13 2004 UTC (10 years, 9 months ago) by wverkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2747 byte(s)
Diff to previous 8528
  o All files

    - Update (c) to 2004

Revision 8528 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Apr 1 00:22:33 2004 UTC (10 years, 9 months ago) by wverkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2746 byte(s)
Diff to previous 8435
 o RooAbsGenContext

   - Add new member function setProtoDataOrder() that allows to specify
     the order in the prototype dataset is traversed

 o Roo*GenContext

   - Propagate setProtoDataOrder() call to self and all sub-generators

 o RooMCStudy

   - Add generator option "r" which randomizes order of prototype
     dataset for every generation cycle. This is useful if you
     specify the "e" option (Poisson fluctuation on #events) in
     conjuction with a dataset. If the dataset order is not randomized,
     the over/undersampled events from the prototype dataset are
     always the sample which may lead to a bias.

Revision 8435 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Mar 19 06:09:47 2004 UTC (10 years, 10 months ago) by wverkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2674 byte(s)
Diff to previous 5212
  Preparation for V1.04 -- RooProdPdf maintance and upgrade
  ---------------------------------------------------------

  o LICENSE, RooBanner

    - Update to year 2004


  o RooAbsArg

    - Add DeleteWatch debug feature: verbal notification
      if an object with this flag is beign deleted


  o RooAbsGenContext, RooGenContext, RooAddGenContext,
    RooConvGenContext, RooSimGenContext, RooMCStudy

    - Introduce concept of auxiliary proto variables, which are
      generated by other PDF components rather than an external dataset


  o RooAbsPdf,RooConvolutedPdf,RooSimultaneous,RooAddPdf

    - Modify genContext() to allow optional specification of auxiliary
      proto variables


  o RooCmdArg

    - Add RooProdPdf as friend


  o RooGenProdProj

    - Modify so that it will work without a denominator term as well

    - Fix in memory management that created hidden links between deep
      cloned trees that involved RooProdPdf nodes with cached information


  o RooProdGenContext

    - Enhance functionality so that it can correctly and optimally
      generate events for 'correlated product' PDFS. Now, irriducible
      PDF terms are generated in a dependency order: 'imported
      dependents', i.e. dependents over which a PDF doesn't normalize
      are always guaranteed to have been generated by another term
      before the importing term is generated. Left over terms wich are
      cross importing cannot be disentangled with a linear dependency
      scheme and are generated as a monolithic PDF. The ProdGen
      context uses the new auxiliary proto variables to correctly
      generate the correlation between imported and normalizing
      observables.


  o RooProdPdf

    - Fix some outstanding link management problems

    - Add new ctor with named arguments that allows to specify
      correlated products

    - Adjust product factorization to understand concept of 'imported'
      dependents, which allows to split composite terms that would
      otherwise be irriducible

    - Add term grouping algorithm that groups together irriducible terms that
      share dependents in mixed roles (normalizing vs imported) over which is
      integrated. Such integrals can only be calculated properly if the
      entire product of such terms is integrated rather than the terms
      individually.

    - Reorganize code a bit: break factorization, term grouping and
      prefabrication of partial integral lists into several functions.

Revision 5212 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Sep 5 04:34:04 2002 UTC (12 years, 4 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2583 byte(s)
Diff to previous 5209
  o All files

   - Fix aesthetic detail in new headers

Revision 5209 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 4 21:07:02 2002 UTC (12 years, 4 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2645 byte(s)
Diff to previous 3078
  o All files

    - Replace file header with new 'legalized' version

  o LICENSE

    - New file with full text of license agreement

Revision 3078 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Oct 22 07:12:14 2001 UTC (13 years, 3 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 2030 byte(s)
Diff to previous 3072
  Complete checkDependents method
  -------------------------------

  o RooAbsArg

    - Implement recursiveCheckDependents() which calls
      checkDependents for every tree node and returns
      the summary error status

  o RooAbsGenContext, RooFitContext

    - Use new recursiveCheckDependents before starting
      fit/generstor

  o RooProPdf

    - Implement checkDependents that verifies that no
      PDF pair has overlapping dependents

  o RooAddPdf

    - Remove call forwarding, now handled by recursiveCheckDependents()

  o RooFormulaVar,RooGenericPdf

    - Remove obsolete checkDependents() functions



  Complete PDF extended mode interface
  ------------------------------------

  o RooAbsPdf

     - Add new virtual extendMode() function that can
       return CanBeExtended, CanNotBeExtended or MustBeExtended

     - Add inline wrapper functions canBeExtended() and mustBeExtended()

  o RooAddPdf

     - Changed to implement new extendMode(). State is either
       CannotBeExtended (n-1 coefs) or MustBeExtended (n coefs
       or no coefs)

  o RooProdPDf

     - Changed to implement new extendMode(). Forward extendMode()
       of single extendable PDF, or return CannotBeExtended if
       there is no extentable PDF

  o RooSimultaneous

     - Changed to implement new extendMode(). Return CanBeExtended
       if all PDFs can be extended. Return MustBeExtended if any
       of the PDFs must be extended. Return CanNotBeExtended otherwise

  o RooFitContext, RooAbsGenContext

     - Use new extendMode() to abort fit/generator if PDF mode
       is incompatible with request



  Miscellaneous
  -------------

  o RooListProxy,RooSetProxy

    - Invert error status in case of empty list/set (gave always an
      error instead of always suppressing it)

Revision 3072 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Oct 19 21:32:22 2001 UTC (13 years, 3 months ago) by david
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 1977 byte(s)
Diff to previous 3048
RooAbsData:

 - define pure virtual fillHistogram() method

RooTreeData:

 - implement fillHistogram() generically for up to 3 dimensions
 - replace redirectServers() with recursiveRedirectServers() in table()

*** what about FormulaVar version of plotOn() ?

RooAbsGenContext:

 - change _theEvent from ptr copy to clone of generated vars so that
   the generator does not disturb their orginal contents

Revision 3048 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Oct 17 05:04:00 2001 UTC (13 years, 3 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 1976 byte(s)
Diff to previous 3026
  Efficient generation of convoluted variables
  --------------------------------------------

  o RooConvGenContext

    - New generator context that generates physics
      model and resolution model separately and returns
      the smeared result

  o RooConvolutedPdf

   - Overload genContext() to use the new efficient
     generator scheme if both resolution model and
     and physics model support direct generation
     of the convolution variable and the resolution
     model has no other dependents

   - Add protected changeModel() function to allow
     RooConvGenContext to change present model on the
     fly.

  o RooGenContext

   - Add option to force consideration for direct generation
     of a given set of dependents. Used by RooConvGenContext
     to force direct generation of convolution variable when
     convoluted with the truth model

  o RooTruthModel

   - Hand code the 6 basis functions used for B mixing
     and decay as special cases. (Significant speed gain)


  o RooResolutionModel

   - In convolution(), swicth from RooAbsArg::findServer(0) to
     RooFormulaVar::getParameter(0)


  Collection Storage / General stability improvement
  --------------------------------------------------

  o RooAbsCollection

    - Switch to use RooLinkedList instead of THashList as
      internal storage mechanism

  o RooLinkedList,RooLinkedListElem,RooLinkedListIter

    - New efficient implementation of a linked list
      that doesn't try to access it's members when
      removing them (nor does any other funny & illegal
      things that all TList subclasses can't seem to stop doing)



  Miscellaneous fixes
  -------------------

   o RooAICRegistry

     - Fix copy ctor (clone owned RooArgSets)

   o RooFormula

     - Introduced delayed compilation of TFormula:
       formula is compiled only when value is requested
       for the first time. (Efficiency gain for RooFormulaVars
       used as basis function, which are often not evaluated
       at all)

   o RooAbsReal

     - Fix erroneous warning message in makeProjectionSet()

   o RooAcceptReject

     - Delete cache in ctor!

   o RooListProxy

     - Bug fix: overload addOwned()

Revision 3026 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Oct 13 23:02:18 2001 UTC (13 years, 3 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 1938 byte(s)
Diff to previous 3022
  o RooAbsGenContext

    - Do not ask for number of expected events if PDF is
      not extentable

    - Add Roo*GenContext as friends

  o RooAddGenContext, RooProdGenContext

    - Adapt to new generator scheme.

  ( RooSimGenContext still needs updating)

Revision 3022 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Oct 13 00:38:54 2001 UTC (13 years, 3 months ago) by david
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 1837 byte(s)
Diff to previous 3015
RooAcceptReject:

 - move cache & iterator initialization into ctor

RooGenContext:

 - finish implementation of using prototype dataset for generation
 - change generate logic to interleave calls to accept-reject with
   those to any optimized generator
 - support optimized generators optionally implemented by AbsPdf subclass

RooAbsGenContext,RooGenContext:

 - move all handling of prototype dataset from GenContext into
   AbsGenContext
 - coordinate dataset filling and event generation in concrete base
   class method that calls subclass initGenerator() and
   generateEvent() methods
 - migrate printToStream() up to base class and support hierarchical
   dump of contexts that use sub-contexts.

RooAddGenContext,ProdGenContext,SimGenContext:

 - make minimal changes to get these classes to compile (code from
   __generate() methods still needs to be migrated into
   initGenerator() and generateEvent())

Revision 3015 - (view) (download) (as text) (annotate) - [select for diffs]
Added Fri Oct 12 01:48:47 2001 UTC (13 years, 3 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooAbsGenContext.h
File length: 1275 byte(s)
  New optimized generator contexts for RooAdd/Prod/SimPdf
  -------------------------------------------------------

   o RooAbsPdf,RooProdPdf,RooAddPdf,RooSimultaneous

     - Introduce protected virtual function genContext()
       which returns the appropriate generator context
       for that PDF:

           RooAbsPdf       --> RooGenContext
           RooProdPdf      --> RooProdGenContext
           RooAddPdf       --> RooAddGenContext
           RooSimultaneous --> RooSimGenContext

   o RooAbsGenContext

     - New abstract generator context

   o RooGenContext

     - Make inherit from RooAbsContext

   o RooAddGenContext

     - New optimized generator context for RooAddPdf
       that generates the components separately

   o RooSimGenContext

     - New optimized generator context for RooSimultaneous
       that generates the components separately

   o RooProdGenContext

     - New optimized generator context for RooProdPdf
       that generates the dependents of each components
       separately and then merges them



  Dataset enhancements
  -------------------

   o RooDataHist

     - Add constructor from TH1,TH2,TH3

     - Add interpolation order to weight(RooArgSet& coord,...)
       function that optionally performs nth order
       interpolation of the weight distribution in the
       real dimensions of the dataset.

       (Currently supports up to 2 real dimensions)

   o RooHistPdf

     - Add option to ctor to optionally interpolate
       histogram contents in real dimensions

   o RooDataSet

     - Introduce merge() methods that adds the columns
       of one or more datasets (of equal length)


  Miscellaneous (fixes Remedy #5603)
  -------------

   o RooRealVar

     - Fix output format in writeToStream(). One ')' too many
     - Read '+/-' as 3 tokens due to change in parsing rules

   o RooArgSet

     - Change punctuation rules of parser in readFromStream
       so that it doesn't break up variable names with
       funny characters

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