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Revision 24280 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sun Jun 15 20:57:45 2008 UTC (6 years, 7 months ago) by wouter
File length: 3303 byte(s)
Diff to previous 23134
   o RooMCIntegrator RooMCStudy RooMinuit RooMsgService RooMultiCategory RooMultiCatIter RooNameReg RooNameSet RooNLLVar 
     RooNormSetCache RooNumber RooNumCdf RooNumConvolution RooNumConvPdf RooNumIntConfig RooNumIntFactory RooNumRunningInt 
     RooObjCacheManager RooParamBinning RooPlot RooPlotable RooPolyVar RooPrintable RooProdGenContext RooProdPdf RooProduct 
     RooProfileLL RooProjectedPdf RooPullVar RooQuasiRandomGenerator RooRandom RooRandomizeParamMCSModule RooRangeBinning 
     RooRealAnalytic RooRealBinding RooRealConstant RooRealIntegral RooRealMPFE RooRealProxy RooRealSumPdf RooRealVar 
     RooRealVarSharedProperties RooRecursiveFraction RooRefCountList RooResolutionModel RooScaledFunc RooSegmentedIntegrator1D 
     RooSegmentedIntegrator2D RooSentinel RooSetPair RooSetProxy RooSharedProperties RooSharedPropertiesList RooSimGenContext 
     RooSimPdfBuilder RooSimultaneous RooSimWSTool RooStreamParser RooStringVar RooSuperCategory RooTable RooThreshEntry 
     RooThresholdCategory RooTObjWrap RooTrace RooTreeData RooTruthModel RooUniformBinning RooWorkspace

     - Upgrade inline documention: make sure that each class has a description.

     - Fix class description header so that it is correctly identified by THtml

     - Updating of data, function member documentation _not_ done yet

Revision 23134 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Apr 11 07:53:39 2008 UTC (6 years, 9 months ago) by rdm
File length: 3293 byte(s)
Diff to previous 21221
move the following directories to "roofit":

roofitcore, roofit

Revision 21221 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Dec 6 10:26:42 2007 UTC (7 years, 1 month ago) by wouter
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 3293 byte(s)
Diff to previous 20988
  o RooSimPdfBuilder, RooCustomizer

    - Clean up ownership bookkeeping of nodes that created vs
      node that are imported. Fixes Savannah #31967

  o RooStreamParser

    - Fix uninitialized value that caused 'conditional jump on
      uninitialized value' when valgrind test macro of Savannah #31967

Revision 20988 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Nov 22 14:54:13 2007 UTC (7 years, 2 months ago) by wouter
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 3229 byte(s)
Diff to previous 20879
 
  ** Bringing trunk up-to-date w.r.t recent changes in branches/dev/roofit branch **

  Aggregated messages from branch commits follow

  --- Date: Fri Oct 19 20:35:30 2007 New Revision: 20422 ---

  o RooAbsArg

    - Add debug level print statement in findConstantNodes()

  o RooAbsAnaConvPdf

    - Do not expose cached RooCoefVars to constant term finding process.



  --- Date: Fri Oct 19 21:03:40 2007 New Revision: 20423 ---

  o RooPlot

    - Add forwarding function for all revent Set*() methods of TH1



  --- Date: Fri Oct 19 21:48:40 2007 New Revision: 20424 ---

  o RooAbsAnaConvPdf

    - Back out special handling of exposure of cached RooCoefVars 
      to constant term finding process.


  o RooObjCacheManager

    - Do not perform constant term finding on cache contents
      if cache manager is configured to perform clearOnRedirect
      for server redirects.



  --- Date: Wed Oct 31 23:36:10 2007 New Revision: 20587 ---

   o RooAbsRealLValue

      - Remove stray debug print statements


   o RooAddPdf

      - Add new default ctor to fix persistence introduced by
        new cache management scheme

      - Add forgotten initializer to regular ctor


   o RooAbsCachedPdf

      - Add formal server-link dependency on cache parameters to 
        RooHistPdf cache representation so that the constant term
        optimizer can make the correct decision

      - Make RooObjCacheManager a persistent data member


   o RooObjCacheManager

     - Add debug message level information

     - Make _optCacheObservables a transient data member and initialize
       it in the default ctor.


   o RooAbsPdf, RooProjectedPdf

      - Add new default ctor to fix persistence introduced by
        new cache management scheme

      - Make RooObjCacheManager a persistent data member


   o RooAbsArg

      - Add methods graphVizTree() that produce input files
        for AT&Ts graphViz to make graphical representation
        of object tree. (To make actual graphics run 'dot -Tps -o graph.ps %s'
        where %s is argument passed to graphVizTree().

   o RooSetProxy

      - Remove stray debug print statements


   o RooSimultaneous

      - Initialize forgotten data member in all ctors


   o RooProdPdf, RooAbsAnaConvPdf

      - Make RooObjCacheManager a persistent data member
        

   o RooSuperCategory

      - Make contained iterator a transient data member
        and initialize it in the default ctor.

   
   o RooCacheManager

      - Add explicit separate default ctor.


   o RooAddModel

      - Completely new implementation, based on existing RooAddPdf.
        RooResolutionModel functionality (convolution(),basisCode())
        taken from original RooAddModel. Reimplement integration strategy
        with caching of integral objects, rather than implementing
        only common analytical component

   o RooAbsAnaConvPdf,RooResolutionModel,RooAbsPdf

      - Remove special hook function that were required for functioning
        of original RooAddModel

   o RooObjCacheManager

      - Keep all _optCacheObservables versions created alive in separate owned list
        and only delete at end in dtor to avoid dangling pointer in complex
        optimizations

   o RooAbsArg

      - In optimizeCacheMode() ignore nodes that already have been const optimized.
        Although const optimization normally happens first, late cache optimization
        that happen upon late creation of objects can take place after const optimization.



  --- Date: Tue Nov 13 12:04:55 2007 New Revision: 20774 ---

   o RooAddModel

      - Completely new implementation, based on existing RooAddPdf.
        RooResolutionModel functionality (convolution(),basisCode())
        taken from original RooAddModel. Reimplement integration strategy
        with caching of integral objects, rather than implementing
        only common analytical component

   o RooAbsAnaConvPdf,RooResolutionModel,RooAbsPdf

      - Remove special hook function that were required for functioning
        of original RooAddModel

   o RooObjCacheManager

      - Keep all _optCacheObservables versions created alive in separate owned list
        and only delete at end in dtor to avoid dangling pointer in complex
        optimizations

   o RooAbsArg

      - In optimizeCacheMode() ignore nodes that already have been const optimized.
        Although const optimization normally happens first, late cache optimization
        that happen upon late creation of objects can take place after const optimization.

   o RooMsgService

      - Some restructuring to speed up code. 

      - Change topic naming from string to enum. 

      - Change debug-level print macros to take inline pre-decision
        based on static RooMsgService boolean that indicates if any debug
        stream is active. Also extend this speedup to doLogD() macro.

      - Allow multiple Topic specifications in a single stream using bit-wise
        or to reduce default number of streams from 6 to 2.

      - Terminate matching logic to streams early for 'universal' streams
        for which the logic does not depend on object properties.


   o RooGlobalFunc

      - Change Topic() argument from RooMsgService::MsgTopic to Int_t to allow specification
        of multiple topics


   o RooDataHist, RooMsgService, RooGenContext, RooAddModel, RooFFTConvPdf
     RooAbsAnaConvPdf, RooAbsReal, RooAddPdf, RooAbsOptGoodnessOfFit, RooAbsCachedPdf
     RooProfileLL, RooObjCacheManager, RooAbsArg, RooAbsPdf, RooRealIntegral
     RooAddGenContext, RooProdGenContext, RooConvGenContext, RooProjectedPdf, RooClassFactory
     RooWorkspace, RooTreeData
 
      - Follow change in RooMsgService interface



 --- Date: Tue Nov 13 13:13:05 2007 New Revision: 20776 ---


   o RooMCStudy

     - Initialize _genParams in 2nd ctor (fixes savannah #31139)



 --- Date: Fri Nov 16 21:24:52 2007 New Revision: 20853 ---


   o RooProdPdf, RooAddition

     - Fix memory leaks found with valgrind


   o RooMsgService, RooRealConstant, RooNumIntFactory, RooMinuit, RooNameReg, RooNumIntConfig, RooArgSet

     - Add cleanup() function to delete singleton at exit


   o RooMinuit

     - Initialize _warnLevel data member (valgrind)


   o RooAddModel

     - Disable coefficient projections in convolution mode
       (savannah #31302)


   o RooTrace

     - Remove messages about objects already deleted when not in verbose mode


   o RooSentinel

     - New class handling cleanup at exit


 --- Date: Mon Nov 19 16:41:52 2007 New Revision: 20901 ---


   o Makefile

     - Makefile to build stressRooFit


   o Makefile.arch

     - Stolen from $ROOTSYS/test


   o stressRooFit

     - Driver framework, base class of unit tests and
       automatic plot, curve, fit result comparison tools
       that unit tests can request


   o TestBasic1

     - Basic test running fitting, generation and plotting on Gaussian p.d.f



 --- Date: Wed Nov 21 17:58:28 2007 New Revision: 20965 ---

  o stressRooFit

    - Add regression test support for Double_t values
      and RooTables

    - In post-test analysis mode, analyze count of
      (silent) ERROR messages and fail test if they
      occcur

    - Eliminate memory leaks in testing framework

    - Add arguments '-n <N>' to run single test and
      argument '-mc' to run suite in memory checking 
      mode in which case no references files are opened
      to avoid ROOT I/O related noise in valgrind leak reports.

    - Link in 21 new tests


  o TestBasic2 ... TestBasic22

    - New stress testing modules. Modules 4,6,7,11,21 and 22
      are empty for now. All others are fully functional.



 --- Date: Thu Nov 22 14:32:14 2007 New Revision: 20980 ---


   o test/TestBasic15, test/TestBasic16, test/TestBasic20

     - Fix memory leak in test code itself


   o test/stressRooFit

     - Activate RooFit internal memory tracing when run in memory check mode


   o RooDataHist

     - Fix memory leak


   o RooMsgService

     - Add Tracing subject

     - Fix bug in printing of multi-subject streams 

     - Keep track of total number of (silent) ERROR messages

     - Add method to access contents of stream configurations


   o RooIntegrator1D, RooIntegrator2D, RooSegmentedIntegrator1D, RooSegmentedIntegrator2D, 
     RooGaussKronrodIntegrator1D, RooAdaptiveGaussKronronIntegrator1D, RooMCIntegrator, RooGrid

     - Fix default ctor to initialize all values used in dtor


   o RooAddModel

     - Add optional boolean to ctor to take ownership of components. Used
       in RooAddModel::convolution()

     - Fix memory leak in convolution()


   o RooFitResult

     - Migrations to RooMsgService

     - Add isIdentical() method for use in regression testing


   o RooCurve, RooHist

     - Add isIdentical() method for use in regression testing


   o Roo1DTable

     - Make persistable

     - Add isIdentical() method for use in regression testing


   o RooMath

     - Migrations to RooMsgService

     - Register static memory allocation of CERF lookup table in RooSentinel
       for cleanup in atexit().


   o RooAbsReal

     - Migrations to RooMsgService

     - Fix invalid read access due to wrong destructor order in plotAsymOn()

     - Fix memory leak in plotOn()


   o RooAbsCollection

     - Restrict creation of hash tables to deep-copy operations
       or shallow copy operations of lists with >30 elements


   o RooAddPdf, RooRealVar, RooDataProjBinding, RooFormulaVar, RooTreeData

     - Migrations to RooMsgService


   o RooAbsOptGoodnessOfFit

     - Fix memory leak


   o RooAbsPdf

     - Migrations to RooMsgService

     - Fix memory leak in fitTo()


   o RooNumIntFactory
            
     - Delete all owned prototype integrators in dtor


   o RooBinning

     - Fix ctors to always initialize _xlo and _xhi


   o RooResolutioModel

     - Register static identity RooFormulaVar with RooSentinel
       for cleanup in atexit()


   o RooSimPdfBuilder

     - Migrations to RooMsgService

     - Delete all fitCats and RooSimultaneous instances created 
       by builder in dtor

     - Return non-const top-level p.d.f. from buildPdf()


   o RooLinkedList

     - First delete hash tables, then clear list instead of
       reverse order to avoid invalid read problems with TList


   o RooMinuit

     - Migrations to RooMsgService

     - Initialize MINUIT print levels to -1 if RooMsgService
       is operating in silent mode

     - Trim initial error on parameters if param +/- 2*errors
       is out of param range


   o RooSentinel

     - Add cleanup hooks from RooMath and RooResolutionModel


   o RooSimultaneous

     - Fix memory leak

     - Migrations to RooMsgService


   o  RooProjectedPdf

     - Implement RooProjectedPdf::CacheElem dtor


   o  RooTable

     - Add pure virtual isIdentical() interface

Revision 20879 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 19 11:22:56 2007 UTC (7 years, 2 months ago) by rdm
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 3046 byte(s)
Diff to previous 20161
Set property svn:eol-style LF on all source and Makefiles. This should avoid
problems with Win32 line endings ending up in the repository. All MS tools
support LF eols fine.

Revision 20161 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Oct 1 16:28:25 2007 UTC (7 years, 3 months ago) by wouter
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 3046 byte(s)
Diff to previous 18738
   o RooAbsCache

    - New abstract base class for cache objects associated with RooAbsArgs.
      Caches register themselves with the owning RooAbsArg and propagate
      all necessary state changes and meta information to objects in the cache


   o RooCacheManager

    - Concrete template implementation of RooAbsCache with an interface
      and functionality styled after RooNormListManager. The template class
      provide no special handling for cache contents that includes RooAbsArg
      objects and does not forward hook calls. It is thus mostly intended
      to cache basic types indexed on a normalization/integration configuration


   o RooObjCacheManager

    - Class derived from RooCacheManager<RooAbsCacheElement> that implements
      all proper call forwarding and handling of state and other meta information
      to RooAbsArg objects embedded in the cache elements. To facilitate this
      functionality the RooAbsCacheElement defines a pure virtual method
      containedArgs() that must be implemented to expose its contents to
      the cache manager. The default behavior on a serverRedirect hook is
      to sterilize the cache. OperMode changes are not forwarded by default
      to the cache contents as cached objects do not necessarily have the
      same operation mode (e.g. if the cache contains an integral of its owner).
      Any calls to optimizeCacheMode(), printCompactTreeHook(), and findConstantNodes()
      are forwarded. Moreover, optimizeCacheMode() calls are remembered and
      any objects inserted in the cache after such a call was received will be
      optimized upon insertion in the cache

   o RooAbsCacheElement

    - Abstract base class for objects to be managed by RooObjCacheManager. Each
      object must in addition to its payload implement the containedArgs()
      member function that exposes the RooAbsArg object content to the manager
      for processing. The argument passed to containedArgs() indicates the use
      case for the returned list of objects, allowing the cache payload to
      return different lists depending upon use. This is for most applications
      not required.


   o RooAbsCachedPdf

    - Abstract base class derived from RooAbsPdf for p.d.f.s that implement 
      value caching in a grid over the entire domain of the observables. 
      The base class implements the overall caching logistics and manages
      the RooDataHists and RooHistPdfs that respresent the cached contents.
      Derived classes must inputBaseName() defined a unique name prefix for
      all cache objects, actualObservales() and actualParameters() to
      determined the actual observables and parameters given a set of 
      available observables and fillCacheObject() which should fill the
      RooDataHist cache for a given obs/params configuration with the
      p.d.fs values.


   o RooAbsSelfCachedPdf

    - Abstract base class derived from RooAbsCachedPdf that implements
      all of the required logistics in RooCachedPdf and only require
      derived classes from RooAbsSelfCachedPdf to implement evaluate().
      Any class derived from RooAbsPdf can thus be trivially switched
      to derived from RooAbsSelfCachedPdf and gain the caching functionality.
      

   o RooCachedPdf

    - Concrete class derived from RooAbsCachedPdf that implements
      the caching of an externally provided p.d.f in the constructor.


   o RooFFTConvPdf

    - Concrete class derived from RooAbsCachedPdf that implement generic
      numeric convolution of two input p.d.f.s using FFT technique
      and convolution theorem. Actual FFTs are calculated by FFTW
      through TVirtualFFT interface in ROOT. Present implementation only supports 
      convolution in one dimension, but this will be extended later
      as there are no fundamental limitations in RooAbsCachedPdf nor FFTW.
 

   o RooHistPdf

    - Moved from RooFit to RooFitCore because it is used by caching classes


   o RooProdPdf

     - Use new RooObjCacheManager to store partial objects

     - Fix memory leak (already patched in 15.0.14h)


   o RooDataHist

     - Use new RooCacheManager template to cache partial bin volumes

     - Add new set(),setAllWeights() method to update current weight and all weights
       respectively, for use in cached p.d.f.s

     - Add sliceIterator() that iterates over all bins in a lower dimensional 
       slice of the dataset


   o RooDataHistSliceIter

    - Class derived from TIterator that implements the iteration
      over a slice in a reduced number of dimensions in a RooDataHist


   o RooMsgService

     - Speed up processing of debug streams in cases where no debug streams are active

     - add macros series oocoutX and oocxcoutX that allow to associate message with
       a different object than *this

   o RooRealBinding

     - Interface new setValue method that allows value to be set outside default
       domain, but inside given alternate named range. For use in numeric integrator
       bindings


   o RooAbsRealLValue

     - Add new inRange() method with range name specifier to check against chosen
       range instead of default range


   o RooCmdConfig

     - Fix dangling return pointer problem in decodeStringOnTheFly() method


   o RooNameSet

     - Fix bug in refoll()


   o RooChi2Var, RooNLLVar

     - Add processing of AddCoefRange() named argument


   o RooConvCoefVar

     - Hold p.d.f in proxy without value/shape state propagation to obtain
       correct dependency of RooConvCoefVar through separate set proxy
       with parameters that do have state propagation

     - In getAnalyticalIntegral() ask for integration coefficient specific
       to coefficient (following interface change in RooAbsAnaConv)


   o RooEfficiency

     - Follow interface change in RooCategoryProxy


   o RooAbsAnaConvPdf

    - Use new RooObjCacheManager to hold normalization and coefficient representations

    - Extend getCoefAnalyticalIntegral() interface so that each coefficient
      can have a separate integration configuration

    - Modify makeCoefVars() such that it constructs the RooConvCoefVars with
      actual dependents for each coefficients, rather than inserting dependencies
      of any of the coefficients in each coefficient. This logic requires support
      from the implementation class that is interface through a new member function
      coefVars()


   o RooAbsReal 

    - Add Boolean data member treeVar that indicates is value buffer is also
      branch buffer of a tree. This information is already present in the RooAbsReal
      but is relatively expensive to retrieve and is always needed in the inner
      loop of data set operations. This extra member significantly speeds up operations

    - Remove superfluous _norm[] token in name returned by integralNameSuffix() if 
      no normalization set is supplied.

    - Add a fillDataHist() method that fills a given RooDataHist with a sampling
      of the given function. Added for support of caching p.d.f.s


    - Downgrading warning on non-dependent projection variables in plotOn() to
      a debug level message

    - Remove function optimizeDirty(),doConstOpt(),undoConstOpt(),findCacheableBranches()
      findUnusedDatasetVariables() and findRedundantCacheServers() as part of reorganization
      of optimization functionality.


   o RooAbsCollection

    - Use iterator semantics instead of vector semantics to process RooLinkedList
      contents in assignment operator

    - Add utility function contentsString() returning stl string with names
      of contents


   o RooAddPdf

    - Rewrite cache management using new RooObjCacheManager that holds projection
      integrals, range integrals and supplemental normalization lists


   o RooAbsOptGoodnessOfFit

    - Improve handling of normalization ranges and reference ranges for test statistics
      containing RooAddPdfs. New named argument in fitTo() and RooNllVar::ctor() pass
      reference range for fractions in RooAddPdf components that do not have an explicit
      fixed definition already. Name all normalization ranges explicitly after the
      subrange to which the're applied to avoid name clashes and conflicts if multiple
      normalization ranges are involved.

    - Rewrite informational messages through RooMsgService

    - Implement new constOptimizeTestStatistic() function that signals all test statistic
      components of a RooAbsArg expression tree to perform their constant term optimization

    - Implement new optimizeCaching() driver function that changes default lazy-evaluation-with-caching
      scheme to test statistic scheme where only parameters objects propagate state changes and
      where all components that depend directly or indirectly on observables have lazy evaluation
      disabled. Changes to p.d.f objects are delegated to RooAbsPdf::optimizeCacheMode(). Changes
      to dataset are delegated to RooAbsData::optimizeReadingWithCaching()

    - Implement new optimizeConstantTerms() function that is back end for constOptimizeTestStatistic
      implementation. 


  o RooAICRegistry, RooNormSetCache

    - Remove tracking of allocation cycles of RooArgSets as this scheme is superseded by
      memory pool mechanism for RooArgSet allocation


  o RooMappedCategory

    - Follow interface change in RooCategoryProxy.


  o RooRealMPFE

    - Follow reorganization of optimization functionality: implement new constOptimizeTestStatistic
      function for forwarding to slave processes.


  o RooRealVar

    - Add new setVal() function with range name to facilite setting of values that are outside
      default range, but inside specified alternate range. Needed for numeric integration and
      certain RooAddPdf coefficient projection.


  o RooAbsArg

    - Make state management functions public [is/set][Value/ShapeDirty](), setOperMode90
  
    - Add static _flipAClean boolean to support setACleanAdirty() static method.

    - Implement mechanism for registration of cache objects with base class RooAbsCache.
      Forward all calls to operModeHook(), redirectServersHook(), optimizeCacheMode()
      and printCompactTreeHook() to all caches for further processing
   
    - Define constOptimize() function and provide default implementation that forwards
      to all servers 

    - Implement optimizeCacheMode() function that puts expression tree in optimized
      caching for test-statistics operations (only cache/lazy evaluate nodes that
      do not (indirectly) depend on observables

    - Implement findConstantNodes() function that identifies all nodes that depend
      exclusively on constant observables and >0 observables that are eligible
      for precalculation and caching in test statistics operations by 
      RooAbsOptTestStatistic::optimizeConstantTerms()

    - Define constOptimizeTestStatistics that signal an expression tree that any
      embedded test statistic objects should perform their constant term optimization.
      Default implementation in RooAbsArg forwards call to all servers.


  o RooAbsPdf

    - Use new RooObjCacheManager to manage normalization integrals cache.

    - Process new SumCoefRange() option in fitTo() that sets the coeffient
      interpretation range for all embedded RooAddPdf objects of which
      the interpretation range was not explicitly set

    - Extend interface of fixAddCoefNormalizationSet(): add extra argument
      that controls if AddCoef normalization set are forcibly overruled
      for objects that already have an explicit range setting.

  
   o RooRealIntegral 

    - Add some informational messaging through RooMsgService, rewrite existing ones

    - Speed up numeric summations by precreating the involved RooSuperCategory
      in the ctor rather than in evaluate().

    - Fix bug in dependency insertion: explicitly require servers to be value
      server to avoid pulling in fake dependents.
    
    - Remove obsolete data members

    - Implement new setACleanADirty() function that atomically flips state of
      all AClean objects to ADirty for the duration of the integration step.
      Replaces the much more expensive prepareACleanFunc() that did this
      only for the objects involved.

    - Process factorizing terms in integral only if the list is not empty

    - Process Jacobian terms in integral only if the list is not empty


  o RooAddGenContext

   - Adapt to cache management chanches in RooAddPdf


  o RooNumIntFactory

   - Use STL classes for internal memory management


  o RooSetProxyy

   - Implement operator new() and operator() delete as required because
     RooArgSet implements them 


  o RooAbsGoodnessOfFit

   - Store and forward AddCoefRange information for embedded RooAddPdf objects

   - Implement constOptimizeTestStatistic() and forward to components


  o RooErrorVar

   - Follow inRange() interface change in RooAbsRealLValue


  o RooConvGenContext

    - Adapt code to make it work with both RooAbsAnaConv objects and
      the newly introduced RooFFTConvPdf


  o RooMinuit

    - Follow reorganization of optimization functionality


  o RooProjectedPdf

    - Store projection using new RooObjCacheManager


  o RooGlobalFunc

    - Add RooFit::SumCoefRange() named argument for RooAbsPdf::fitTo() 
      and RooNLLVar::ctor() and RooChi2Var::ctor()


  o RooClassFactory

    - Extend existing makePdf(),makeFunction and makeClass() functions
      to also accept RooAbsCategory arguments, to accept an optional string
      inserted as the return value expression inserted in the 
      evaluate() method of the class created, as well as as option string
      specifying one or more analytical integrations of the given function
      expression that will be advertised in the generated getAnalyticalIntegral()
      code and implemented in the generated analyticalIntegral() code

    - Add makeAndCompileFunction() and makeAndCompilePdf methods that
      generate the code and immediate compile it through ROOTs ACliC interface.
      These functions have a simpler interface because the list of arguments
      of the function to be created can be specified as a const RooArgSet&
      rather than a string with a list of names, thus making it easier
      for on-the-fly definition of compiled objects.

    - Add defineFunction() and definePdf() methods define and compile
      a function/pdf using the above functions and immediately instantiate
      an object of the given type passing the specified RooArgSet arguments
      to the constructor of the object. These functions make a compiled
      equivalent of RooFormulaVar based on the TFormula interpreter, i.e.

           RooAbsReal* f = new RooFormulaVar("f","D(1-2w)",RooArgSet(D,w)) ;

      becomes
       
           RooAbsReal* f = RooClassFactory::defineFunction("f","D(1-2w)",RooArgSet(D,w)) ;

   
  o RooAbsCategory

   - Add Boolean data member treeVar that indicates is value buffer is also
     branch buffer of a tree. This information is already present in the RooAbsReal
     but is relatively expensive to retrieve and is always needed in the inner
     loop of data set operations. This extra member significantly speeds up operations

   - Construct explit clean name for TBranch name if node is cached, equivalent
     to what is done in RooAbsReal. Needed because new constOptimizer can also
     cache RooAbsCategory objects


  o RooArgSet

   - Implement operator new() and operator delete() to implement memory pool scheme
     for RooArgSets. The goal of this implementation is to insure that two RooArgSet
     pointers are _never_ the same. This allows to RooNormSet cache manager to safely
     and quickly index integration and normalization configurations by evaluating
     the contents of a RooArgSet only the first time it sees it.


  o RooSimultaneous

   - Implement caching of partial integrals using new RooObjCacheManager

   - Following interface change in RooCategoryProxy ;


  o RooAbsData

   - Defined pure virtual methods optimizeReadingWithCache() and allClientsCached()


  o RooTreeData

   - Implement optimizeReadingWithCache() which determines given a p.d.f to be
     evaluated and a list of the nodes that are cached for it, which observables
     in the dataset are no longer required because they are either not an observable
     of the p.d.f, or they exclusively feed nodes that are cached. Reading of these
     observables is disabled through SetBranchStatus().
  
   - Move allClientsCached() utility function here from RooAbsReal.


  o RooCategoryProxy

   - Remove const char*() conversion operator in favor of a const char* label() method
     to remove possibly ambiguities in C++ math expressions involving category proxies.


  o LinkDef3.h

   - Add newly defined classes

Revision 18738 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri May 11 10:15:52 2007 UTC (7 years, 8 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 3049 byte(s)
Diff to previous 12063
fixes in porting code to ROOT cvs

Revision 12063 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jun 16 09:31:32 2005 UTC (9 years, 7 months ago) by wverkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 3085 byte(s)
Diff to previous 11181
   o RooFit.hh

     - New global header file for compiler patches. Currently contains
       single patch for SunOS imported from BaBar.hh


   o All .cc files

     - Include RooFit.hh as first header file


   o RooAbsData

     - Make all plotOn() methods public


   o RooAbsProxy

     - Include pragma to switch of VC++ warning C4355
       "'this' : used in base member initializer list'"
       which would otherwise be triggered on each proxy initialization.
       (each proxy constructor _expects_ a base class ptr so the warning
        is misleading)

   o RooAdaptiveGaussKronrodIntegrator1D, RooDataHist, RooGaussKronrodIntegrator1D,
     RooGraphSpring, RooMCIntegrator, RooPolyVar, RooTreeData

     - Change pow --> TMath::power() to eliminate windows compiler warnings


   o RooEllipse

     - Change constant M_PI to TMath::Pi()


   o RooGlobalFunc

     - Change RooConst --> RooFit::RooConst as functions has been moved into namespace


   o RooMath

     - Add erf() and erfc() forwarder functions to TMath::Erf() and TMath::Erfc()


   o RooRealConstant

     - Move RooConst() function into namespace RooFit



   o RooSimultaneous

     - Remove one default parameter from implementation version of plotOn() to resolve
       overloading ambiguity reported by AIX compiler


   o RooTreeData

     - Make nested struct PlotOpt public to avoid CINT access problems


   o RooTruthModel

     - Add explicit cast to fabs() of proxy as it gives warning in Windows C++

Revision 11181 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Feb 25 14:23:04 2005 UTC (9 years, 10 months ago) by wverkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 3061 byte(s)
Diff to previous 8538
   o All files

     - Update copyright notice from 2004 to 2005

Revision 8538 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Apr 5 22:44:13 2004 UTC (10 years, 9 months ago) by wverkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 3059 byte(s)
Diff to previous 5212
  o All files

    - Update (c) to 2004

Revision 5212 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Sep 5 04:34:04 2002 UTC (12 years, 4 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 2997 byte(s)
Diff to previous 5209
  o All files

   - Fix aesthetic detail in new headers

Revision 5209 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 4 21:07:02 2002 UTC (12 years, 4 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 3059 byte(s)
Diff to previous 4266
  o All files

    - Replace file header with new 'legalized' version

  o LICENSE

    - New file with full text of license agreement

Revision 4266 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Mar 29 03:19:01 2002 UTC (12 years, 9 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 2380 byte(s)
Diff to previous 4147
  o RooAbsCollection

    - add overlaps() function to check for common elements in to collections

  o RooAbsReal

    - New feature: Allow sliced variables to appear in projected data set.
      If so, a reduced dataset is created on the fly consisting of only
      events that are part of the current slice. This saves the caller
      the work of creating a projection dataset for the subset of events
      of the plotted slice

    - Bug fix: before activating coefficient projection transformation,
      check if transformation is not identity (e.g. from (A,B) -> (B,A))

  o RooRealIntegral

    - Make RooIntegratorConfig* pointer data member non-const. This gives
      some trouble in the Streamer() generated by older root versions

  o RooSimPdfBuilder

    - Add buildConfig() methods that take a RooArgSet of dependents instead
      of a dataset

  o RooSimultaneous

    - Overhaul of plotting interface. Now require that a projection dataset
      with (at least) the components of the index category is always given,
      even if only a single state is plotted.

      This allows a consistent treatment of normalization in slice plotting
      w.r.t to regular PDFs: the plotted PDF is multiplied by the fraction
      of projected data events selected in the plotted slice.

      Substantial work on index projection engine now allows all possible
      slices, such as a slice in only one of the components of a composite
      index category.

      Implement 'auto-reduction' feature on projection dataset, as is done
      in RooAbsReal::plotOn. In addition also remove index category-related
      columns of dataset before passing it on the the RooAddPdf plot variable
      This eliminates some fake warning messages

      Major improvement in slicing/projection info messages

Revision 4147 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Mar 7 06:22:24 2002 UTC (12 years, 10 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 1871 byte(s)
Diff to previous 3689
  Non-uniform binning retrofitting
  ---------------------------------

  o RooAbsArg, RooAbsCategory, RooAbsCategoryLValue,
    RooAbsReal, RooAbsRealLValue

    - Remove references to bin iterators

  o RooAbsBinIter,RooRealFixedBinIter,RooCatBinIter

    - Remove (now obsolete)

  o RooAbsBinning

    - New abstract base class for binning specifications.

  o RooAbsData

    - Modify plotOn() method to take optional RooAbsBinning
      pointer

  o RooAbsLValue

    - Change getFitBinWidth to take bin number to accomodate
      non-uniform bin widths

  o RooAbsRealLValue

    - Remove all fitBinXXX methods()

    - Add createHistogram methods that take (arrays of) RooAbsBinning
      objects as binning specifiers

    - Add getBinning() method that exports the current binning object

    - Re-implement getFitMin/Max/Bins using the binning object

  o RooAbsString

    - Remove obsolete plotBin methods

  o RooBinning

    - Implementation of RooAbsBinning with arbitrary binning.
      Add new boundaries with addBoundary() or addBoundaryPair()
      methods

  o RooDataHist

    - Precalculate bin volume per bin, instead of as a single variable
      to reflect the effects of non-uniform binning

    - Upgrade ctor from TH1 to allow import of non-uniformly binned
      THx objects

    - Add correctForBinsSize option to weight(<coord>) function.

    - Upgrade weight interpolation functions to handle non-uniform
      grids

    - Add new binVolume() member function to export the current bins
      volume (works like weight())

  o RooDouble

    - Auxiliary class for RooBinning that inherits from TObject,
      is sortable and stores a Double_t as value

  o RooErrorVar

    - Reimplement fit limits and binning in terms of a RooAbsBinning object

  o RooHist

    - Bug fix in addPoint : forgot to multiply y value with
      bin width correction factor

  o RooHistPdf

    - Change to use RooDataHists new weight function that applies
      bin volume correction internally instead of in RooHistPdfs
      analyticalIntegral. (Necessary when bin volume is not uniform)

  o RooLinTransBinning

    - Implementation of RooAbsBinning that present a linear transformation
      of another RooAbsBinning

  o RooLinearVar

    - Reimplement fit limits and binning in terms of a
      RooLinTransBinning object

  o RooMath

    - Add interpolation routine that points that are not
      uniformly distributed

  o RooPlot

    - Add bin width correction factor to number of events
      in updateFitRangeNorm() to account for the difference
      in the nominal bin width and the average bin width
      of the histogram

  o RooRealVar

    - Reimplement fit limits and binning in terms of a RooAbsBinning
      object

    - Add setBinning() method to change the current binning

  o RooTreeData

    - Modify plotOn() methods to take an optional RooAbsBinning
      object that specifies the desired binning.

  o RooUniformBinning

    - Implementation of RooAbsBinning that efficiently represents
      a uniform binning


  RooSimPdfBuilder upgrade
  ------------------------

  o RooCustomizer

    - Allow splitting of branch nodes in addition to leaf nodes.
      (This makes sense when pre-instantiated specializations
      are provided by the caller)

  o RooSimPdfBuilder

    - Add addSpecializations() method for user to supplied
      pre-instantiated split-node specializations

    - Allow branches to be split in addition to parameters


  Miscellaenous
  -------------

  o RooFitContext

    - Modify fit glue function to call the internal version
      of RooFitContext::nLogLikelihood

  o RooMCStudy

     - Fix range checking algorithm in fitResult() and genData()

  o RooBanner

    - Prints banner when RooFitCore library is loaded

Revision 3689 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jan 17 01:32:18 2002 UTC (13 years ago) by verkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 1816 byte(s)
Diff to previous 3362
  o RooSimPdfBuilder

    - Make inherit from TObject

    - Change return value of buildPdf() from RooAbsPdf* to
      RooSimultaneous*

Revision 3362 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sun Dec 2 23:47:43 2001 UTC (13 years, 1 month ago) by verkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 1768 byte(s)
Diff to previous 3270
  o RooSimPdfBuilder

    - Add verbose flag to build() function which will be passed
      down to the RooCustomizer build() function

Revision 3270 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Nov 21 21:35:05 2001 UTC (13 years, 2 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 1698 byte(s)
Diff to previous 3150
  o RooAbsArg

    - Add RooSimPdfBuilder as friend

  o RooConvolutedPdf

    - Fix compiler errors on Solaris


  o RooSimPdfBuilder

    - Allow splitting of parameters by derived categories

Revision 3150 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Nov 1 22:52:22 2001 UTC (13 years, 2 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 1572 byte(s)
Diff to previous 3135
   o RooAbsPdf

     - In getVal() without normalization change to use
       evalTracePdf instead of evalTrace (obsolete)

   o RooAbsReal

     - Change signature of static method createHistogram()
       to take non-const RooArgList& as argument to avoid
       overloading ambiguity with non-static createHistogram()
       with RooAbsReal& in same slot.

     - Fix asymmetry plotting. Relative normalization of positive
       and negative component of functions asymmetry was not
       properly accounted for

   o RooAbsString

     - Change internal storage mechanismg from char[1024]
       to a heap based char array. Length can be specified in ctor

   o RooArgSet

     - Support input file sectioning in readFromFile()

   o RooCustomizer

     - Minor adjustment in verbose output

   o RooDataSet

     - In read(). wllow space in addition to ',' as separator between
       file names

   o RooFormula

     - In DefinedVariable(), check that for objects of type 'cat::state'
       the given state is actually defined in cat.

   o RooSimPdfBuilder

     - Use new custom string length of RooStringVar in various places

   o RooStreamParser

     - Change code to handle string tokens of more than 1024 chars
     - Fixes in EOF detection logic

Revision 3135 - (view) (download) (as text) (annotate) - [select for diffs]
Added Tue Oct 30 07:29:15 2001 UTC (13 years, 2 months ago) by verkerke
Original Path: trunk/roofitcore/inc/RooSimPdfBuilder.h
File length: 1445 byte(s)
  o RooAbsArg

    - Sort parameter list returned by getParameters()

  o RooAbsPdf

    - In plotOn() fix NumEvent normalization for extended PDFs.
      Add RelativeExpected option for extendable PDFs to specify
      a scale factor relative to the normalization obtained from
      the extended PDFs number of expected events

  o RooAbsReal

    - Add forceNumInt() option to disable analytical integration.
      Mostly useful for testing numerical vs analytic results

  o RooFitContext

    - Another fix in parameter passing to TMinuit

  o RooPlot

    - Prefill bin width from RooRealVar binning when constructed
      from a RooRealVar

  o RooResolutionModel

    - Overload getNorm() from RooAbsPdf to suppress the warning message
      given by RooAbsPdf when the normalization is zero (legitimate value
      for convolution objects)

  o RooSimPdfBuilder

    - New high-level manager class to construct RooSimultaneous PDFs
      from a set of customized prototype PDFs. Customization is
      performed internally by an ensemble of RooCustomizer objects.

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