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Revision 47596 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Nov 23 09:59:03 2012 UTC (2 years, 2 months ago) by hvoss
File length: 10493 byte(s)
Diff to previous 44507
Finally an update of the trunk with latest patches and other fixes from dev

Revision 44507 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 4 12:30:41 2012 UTC (2 years, 7 months ago) by axel
File length: 10182 byte(s)
Diff to previous 40005
Remove
  using namespace std;
from Riostream.h, which has huge consequences for all of ROOT.
Riostream.h is now a simple wrapper for fstream, iostream, iomanip for backward compatibility; Riosfwd.h simply wraps iosfwd.

Because of templates and their inline functions, Riostream.h needed to be included in headers, too (e.g. TParameter.h), which violated the assumption that Riostream.h is not exposing its using namespace std to headers.
ROOT now requires R__ANSISTREAM, R__SSTREAM, which does not change the set of supported compilers.

Without "using namespace std", several identifiers are now prefixed by std::; e.g. roofit/* source files now have a using namespace std to keep their coding style.
TFile::MakeProject() now generates "using namespace std" to convert the CINT-style class names into C++ ones.

Revision 40005 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 27 15:29:10 2011 UTC (3 years, 6 months ago) by stelzer
File length: 10172 byte(s)
Diff to previous 39998
remove mergeinfo properties

Revision 39998 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 27 14:46:38 2011 UTC (3 years, 6 months ago) by stelzer
File length: 10172 byte(s)
Diff to previous 39989
coverity fix

Revision 39989 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 27 13:19:22 2011 UTC (3 years, 6 months ago) by stelzer
File length: 10172 byte(s)
Diff to previous 39848
fix event requests for Category classifier

Revision 39848 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jun 21 11:52:58 2011 UTC (3 years, 7 months ago) by evt
File length: 10172 byte(s)
Diff to previous 38943
copy tmva/dev 39001:39355 to trunk

Revision 38943 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Apr 20 08:03:25 2011 UTC (3 years, 9 months ago) by evt
File length: 10172 byte(s)
Diff to previous 38938
copying coverity fixes from tmva/dev to trunk, r38939:38941

Revision 38938 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Apr 20 07:12:51 2011 UTC (3 years, 9 months ago) by evt
File length: 10172 byte(s)
Diff to previous 38895
copying coverity fixes from tmva/dev to trunk, r38897:38937

Revision 38895 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Apr 18 11:59:54 2011 UTC (3 years, 9 months ago) by evt
File length: 10172 byte(s)
Diff to previous 38719
copying tmva/dev to trunk, r38718:38894

Revision 38719 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Apr 4 12:22:28 2011 UTC (3 years, 9 months ago) by evt
File length: 10016 byte(s)
Diff to previous 38609
copying tmva/dev to trunk, r38611:38717

Revision 38609 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Mar 24 16:06:32 2011 UTC (3 years, 10 months ago) by evt
File length: 10016 byte(s)
Diff to previous 38477
copying tmva/dev to trunk, r38480:38608

Revision 38477 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Mar 17 10:57:49 2011 UTC (3 years, 10 months ago) by evt
File length: 9918 byte(s)
Diff to previous 38475
copying tmva/dev to trunk, fix compile error under windows, avoid use of math.h

Revision 38475 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Mar 17 10:46:00 2011 UTC (3 years, 10 months ago) by evt
File length: 9918 byte(s)
Diff to previous 37399
copying tmva/dev to trunk

Revision 37399 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Dec 8 15:22:07 2010 UTC (4 years, 1 month ago) by evt
File length: 10752 byte(s)
Diff to previous 36966
several bug fixes to TMVA copied from dev
fix to multiple reader problem, ROOT-bug 76076, make static variable in
event non-static
fix valgrind error due to uninitialized values
fix 5 more valgrind error detected in unit tests
fix to sub-optimal BDT settings
fix bug fix in Likelihood with VarTransforms, fixed unit tests breaks
LikelihoodD and LikelihoodPCA

Revision 36966 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Nov 26 09:50:13 2010 UTC (4 years, 1 month ago) by evt
File length: 10715 byte(s)
Diff to previous 33993
copying tmva/dev(rev 36945) to trunk

Revision 33993 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Jun 19 11:25:14 2010 UTC (4 years, 7 months ago) by stelzer
File length: 10709 byte(s)
Diff to previous 33928
fix VC warnings and problem with CutsPCA/CutsD

Revision 33928 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jun 15 16:19:31 2010 UTC (4 years, 7 months ago) by stelzer
File length: 10836 byte(s)
Diff to previous 31486
Multi-Class training, method-init via memory-resident XML, bug fix in event info shuffling

Revision 31486 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Dec 1 16:00:41 2009 UTC (5 years, 1 month ago) by stelzer
File length: 11128 byte(s)
Diff to previous 31458
Fixed coding rule violations

Revision 31458 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 30 13:58:20 2009 UTC (5 years, 1 month ago) by stelzer
File length: 10441 byte(s)
Diff to previous 29205
First import of TMVA from dev branch

Revision 29205 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jun 24 19:33:19 2009 UTC (5 years, 7 months ago) by brun
File length: 8278 byte(s)
Diff to previous 29195
From Andreas Hoecker:
fix for windows. Functions returning a static global cannot be inlined.

Revision 29195 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jun 24 10:39:49 2009 UTC (5 years, 7 months ago) by brun
File length: 7354 byte(s)
Diff to previous 29122
From Joerg and TMVA team:
fix coding conventions

Revision 29122 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 22 06:51:30 2009 UTC (5 years, 7 months ago) by brun
File length: 7349 byte(s)
Diff to previous 27320
From the TMVA team;
New version of TMVA to be described soon.

Revision 27320 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Feb 2 06:40:36 2009 UTC (5 years, 11 months ago) by brun
File length: 8311 byte(s)
Diff to previous 27001
From Joerg Stelzer:
Fix several places where local variables were initialized via DeclareOptionRef

Revision 27001 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Dec 18 08:38:09 2008 UTC (6 years, 1 month ago) by brun
File length: 8318 byte(s)
Diff to previous 23334
From Peter Hristov:
Changes to compile on OpenSolaris. There was some mess with const declarations of the arguments.

Revision 23334 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Apr 19 18:38:57 2008 UTC (6 years, 9 months ago) by brun
File length: 8311 byte(s)
Diff to previous 21630
From Joerg Stelzer:
The following list contains the changes since ROOT release 5.18/00

    * Dataset preparation:
          o Preselection: Preselection cuts now work on arrays. Previously used TEventlists (only event wise pass/fail) were replaced by TreeFormulas (sensitive to array position). Thanks to Arnaud Robert (LPNHE) for his contributions.
          o Tree assignment to signal/background: Signal and background trees can now be assigned individually to training and test purposes. This is achieved by setting the third parameter of the Factory::AddSignalTree/AddBackgroundTree() methods to "Train" or "Test" (const string). The only restriction is that either none or all signal (background) trees need to be specified with that option. It is possible to mix the two modes, for instance one can assign individual training and test trees for signal, but not for background.
          o Direct tree building: For increased flexibility, users can also directly input signal and background, training and test events to TMVA, instead of letting TMVA interpret user-given trees. Note that either one of the two approaches must be chosen (no mix). The syntax of the new calls is described in the macros/TMVAnalysis.C test macro. --> The User runs the event loop, copies for each event the input variables into a std:vector, and "adds" them to TMVA, using the dedicated calls: factory->AddSignalTrainingEvent( vars, signalWeight ); (and replacing "Signal" by "Background", and "Training" by "Test"). After the event loop, everything continues as in the standard method. 
    * Methods:
          o Simulated Annealing in Cuts,FDA: Entirely new Simulated Annealing (SA) algorithm for global minimisation in presence of local minima (optionally used in cut optimisation (MethodCuts) and the Function Discriminant (MethodFDA)). The SA algorithm features two approaches, one starting at minimal temperature (ie, from within a local minimum), slowly increasing, and another one starting at high temperature, slowly decreasing into a minimum. Code developed and written by Kamil Bartlomiej Kraszewski, Maciej Kruk and Krzysztof Danielowski from IFJ and AGH/UJ, Krakow, Poland.
          o Cuts: Added printouts, quoting the explicit cut application for given signal efficiency. In case of transformations of the input variables, the full expressions are given. Added warning to Fisher in case of variable normalisation.
          o Cuts: Added physical limits to min/max cuts if smart option is used.
          o BDT: removed hard-coded weight file name; now, paths and names of weight files are written as TObjStrings into ROOT target file, and retrieved for plotting; available weight files (corresponding to target used) can be chosen from pop-up GUI.
          o BDT: Changes in handling negative weights in BDT algorithm. Events with negative weights now get their weight reduced (*= 1/boostweight) rather than increased (*= boostweight) as the other events do. Otherwise these events tend to receive increasingly stronger boosts, because their effects on the separation gain are as if background events were selected as signal and vice versa (hence the events tend to be "wanted" in signal nodes, but are boosted as if they were misclassified). In addition, the separation indices are protected against negative S or S+B returning 0.5 (no separation at all) in case that occurs.
          o BDT: In addition there is a new BDT option to ignore events with negative event weights for the training. This option could be used as a cross check of a "worst case" solution for Monte Carlo samples with negative weights. Note that the results of the testing phase still include these events and are hence objective.
          o BDT: Added randomised trees: similar to the "Random Forests" technique of Leo Breiman and Adele Cutler, it uses the "bagging" algorithm and bases the determination of the best node-split during the training on a random subset of variables only, which is individually chosen for each split.
          o BDT: Move to TRandom2 for the "bagging" algorithm and throw random weights according to Poisson statistics. (This way the random weights are closer to a resampling with replacement algorithm.)
          o TMlpANN: Extended options to TMultilayerPerceptron learning methods. Added example for reader application: TMVApplication.py 
    * GUI:
          o Parallel Coordinates: New GUI button for Parallel Coordinate plotting. 
    * Application:
          o Added Python example for reader application: TMVApplication.py
    * Bug fixes:
          o TMlpANN: fixed crash with ROOT>=5.17 when using large number of test events; also corrected bias in cross validation: before the test events were used, which led to an overestimated performance evaluation in case of a small number of degrees of freedom; separate now training tree in two parts for training and validation with configurable ValidationFraction
          o Cuts: Corrected inconsistency in MethodCuts: the signal efficiency written out into the weight file does not correspond to the center of the bin within which the background rejection is maximised (as before) but to the lower left edge of it. This is because the cut optimisation algorithm determines the best background rejection for all signal efficiencies belonging into a bin. Since the best background rejection is in general obtained for the lowest possible signal efficiency, the reference signal efficiency is the lowest value in the bin.
          o Cuts: Fixed Cuts (optimisaton) method -> event with smallest value was not included in search for optimal cut (thanks to Dimitris Varouchas, LAL-Orsay, for helping us detecting the problem).
          o Genetic Algorithm: Corrected configurable random seed in GeneticAlgorithm (thanks to David Gonzalez Maline, CERN, for pointing this out)
          o GUI: Fixes in input-variable and MVA plotting: under/over-flow numbers given on plots were not properly normalised; the maximum histogram ranges have been increased to avoid cut-offs. Thanks to Andreas Wenger, Zuerich, for pointing these out.

Revision 21630 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jan 10 19:40:44 2008 UTC (7 years ago) by brun
File length: 8309 byte(s)
Diff to previous 20882
From Joerg Stelzer:
* documentation of all classes ( I hope I caught all 17 of them, but I didn't know how to check except by looking through all the files)
* plugin capabilities for user developed multivariate classifiers
* An improved GUI where the user can print the significance curves for adjustable signal and background yields
* A fix to a compiler complaint that Axel told me about

Revision 20882 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 19 11:31:26 2007 UTC (7 years, 2 months ago) by rdm
File length: 8021 byte(s)
Diff to previous 19826
Set property svn:eol-style LF on all source and Makefiles. This should avoid
problems with Win32 line endings ending up in the repository. All MS tools
support LF eols fine.

Revision 19826 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 19 19:56:11 2007 UTC (7 years, 4 months ago) by rdm
File length: 8021 byte(s)
Diff to previous 19069
imported svn:keywords Id property

Revision 19069 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jun 19 13:26:21 2007 UTC (7 years, 7 months ago) by brun
File length: 8069 byte(s)
Diff to previous 18548
From Joerg Stelzer:
New version of TMVA

Revision 18548 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sat Apr 21 14:20:46 2007 UTC (7 years, 9 months ago) by brun
File length: 7752 byte(s)
Diff to previous 18524
From Joerg Stelzer
Fix coding conventions as well as portability problems on Solaris.

Revision 18524 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Apr 19 06:53:02 2007 UTC (7 years, 9 months ago) by brun
File length: 7729 byte(s)
Diff to previous 16836
from Joerg Stelzer:
New version of TMVA (3.7.2)

Revision 16836 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 20 15:35:28 2006 UTC (8 years, 2 months ago) by brun
File length: 8105 byte(s)
Diff to previous 16819
From Joerg Stelzer:
More documentation added to all classes

Revision 16819 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Sun Nov 19 10:11:42 2006 UTC (8 years, 2 months ago) by brun
File length: 8105 byte(s)
Diff to previous 16805
From Joerg Stelzer:
Fix coding conventions and improve comments in class documentation

Revision 16805 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Nov 17 16:00:03 2006 UTC (8 years, 2 months ago) by brun
File length: 8105 byte(s)
Diff to previous 16768
New version of TMVA fixing many coding conventions violations.
New version of the tmva test suite. To execute it run the script
TMVAnalysis.C

Revision 16768 - (view) (download) (as text) (annotate) - [select for diffs]
Added Wed Nov 15 10:40:17 2006 UTC (8 years, 2 months ago) by rdm
File length: 7761 byte(s)
New version.

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