|
ROOT 6.18/05 Reference Guide |
Abstract base class for all high level ml algorithms, you can book ml methods like BDT, MLP.
SVM etc.. and set a TMVA::DataLoader object to run your code in the overloaded method Evaluate.
Base class for all machine learning algorithms
Definition at line 43 of file Envelope.h.
Public Member Functions | |
| ~Envelope () | |
| Default destructor. More... | |
| virtual void | BookMethod (TString methodname, TString methodtitle, TString options="") |
| Method to book the machine learning method to perform the algorithm. More... | |
| virtual void | BookMethod (Types::EMVA method, TString methodtitle, TString options="") |
| Method to book the machine learning method to perform the algorithm. More... | |
| virtual void | Evaluate ()=0 |
| Virtual method to be implemented with your algorithm. More... | |
| DataLoader * | GetDataLoader () |
| Method to get the pointer to TMVA::DataLoader object. More... | |
| TFile * | GetFile () |
| Method to get the pointer to TFile object. More... | |
| std::vector< OptionMap > & | GetMethods () |
| Method get the Booked methods in a option map object. More... | |
| Bool_t | HasMethod (TString methodname, TString methodtitle) |
| function to check methods booked More... | |
| Bool_t | IsModelPersistence () |
| Method to see if the algorithm model is saved in xml or serialized files. More... | |
| Bool_t | IsSilentFile () |
| Method to see if a file is available to save results. More... | |
| Bool_t | IsVerbose () |
| Method to see if the algorithm should print extra information. More... | |
| virtual void | ParseOptions () |
| Method to parse the internal option string. More... | |
| void | SetDataLoader (DataLoader *dalaloader) |
| Method to set the pointer to TMVA::DataLoader object. More... | |
| void | SetFile (TFile *file) |
| Method to set the pointer to TFile object, with a writable file. More... | |
| void | SetModelPersistence (Bool_t status=kTRUE) |
| Method enable model persistence, then algorithms model is saved in xml or serialized files. More... | |
| void | SetVerbose (Bool_t status) |
| Method enable print extra information in the algorithms. More... | |
Public Member Functions inherited from TMVA::Configurable | |
| Configurable (const TString &theOption="") | |
| constructor More... | |
| virtual | ~Configurable () |
| default destructor More... | |
| void | AddOptionsXMLTo (void *parent) const |
| write options to XML file More... | |
| template<class T > | |
| void | AddPreDefVal (const T &) |
| template<class T > | |
| void | AddPreDefVal (const TString &optname, const T &) |
| void | CheckForUnusedOptions () const |
| checks for unused options in option string More... | |
| template<class T > | |
| TMVA::OptionBase * | DeclareOptionRef (T &ref, const TString &name, const TString &desc) |
| template<class T > | |
| OptionBase * | DeclareOptionRef (T &ref, const TString &name, const TString &desc="") |
| template<class T > | |
| TMVA::OptionBase * | DeclareOptionRef (T *&ref, Int_t size, const TString &name, const TString &desc) |
| template<class T > | |
| OptionBase * | DeclareOptionRef (T *&ref, Int_t size, const TString &name, const TString &desc="") |
| const char * | GetConfigDescription () const |
| const char * | GetConfigName () const |
| const TString & | GetOptions () const |
| MsgLogger & | Log () const |
| virtual void | ParseOptions () |
| options parser More... | |
| void | PrintOptions () const |
| prints out the options set in the options string and the defaults More... | |
| void | ReadOptionsFromStream (std::istream &istr) |
| read option back from the weight file More... | |
| void | ReadOptionsFromXML (void *node) |
| void | SetConfigDescription (const char *d) |
| void | SetConfigName (const char *n) |
| void | SetMsgType (EMsgType t) |
| void | SetOptions (const TString &s) |
| void | WriteOptionsToStream (std::ostream &o, const TString &prefix) const |
| write options to output stream (e.g. in writing the MVA weight files More... | |
Public Member Functions inherited from TNamed | |
| TNamed () | |
| TNamed (const char *name, const char *title) | |
| TNamed (const TNamed &named) | |
| TNamed copy ctor. More... | |
| TNamed (const TString &name, const TString &title) | |
| virtual | ~TNamed () |
| TNamed destructor. More... | |
| virtual void | Clear (Option_t *option="") |
| Set name and title to empty strings (""). More... | |
| virtual TObject * | Clone (const char *newname="") const |
| Make a clone of an object using the Streamer facility. More... | |
| virtual Int_t | Compare (const TObject *obj) const |
| Compare two TNamed objects. More... | |
| virtual void | Copy (TObject &named) const |
| Copy this to obj. More... | |
| virtual void | FillBuffer (char *&buffer) |
| Encode TNamed into output buffer. More... | |
| virtual const char * | GetName () const |
| Returns name of object. More... | |
| virtual const char * | GetTitle () const |
| Returns title of object. More... | |
| virtual ULong_t | Hash () const |
| Return hash value for this object. More... | |
| virtual Bool_t | IsSortable () const |
| virtual void | ls (Option_t *option="") const |
| List TNamed name and title. More... | |
| TNamed & | operator= (const TNamed &rhs) |
| TNamed assignment operator. More... | |
| virtual void | Print (Option_t *option="") const |
| Print TNamed name and title. More... | |
| virtual void | SetName (const char *name) |
| Set the name of the TNamed. More... | |
| virtual void | SetNameTitle (const char *name, const char *title) |
| Set all the TNamed parameters (name and title). More... | |
| virtual void | SetTitle (const char *title="") |
| Set the title of the TNamed. More... | |
| virtual Int_t | Sizeof () const |
| Return size of the TNamed part of the TObject. More... | |
Public Member Functions inherited from TObject | |
| TObject () | |
| TObject constructor. More... | |
| TObject (const TObject &object) | |
| TObject copy ctor. More... | |
| virtual | ~TObject () |
| TObject destructor. More... | |
| void | AbstractMethod (const char *method) const |
| Use this method to implement an "abstract" method that you don't want to leave purely abstract. More... | |
| virtual void | AppendPad (Option_t *option="") |
| Append graphics object to current pad. More... | |
| virtual void | Browse (TBrowser *b) |
| Browse object. May be overridden for another default action. More... | |
| ULong_t | CheckedHash () |
| Check and record whether this class has a consistent Hash/RecursiveRemove setup (*) and then return the regular Hash value for this object. More... | |
| virtual const char * | ClassName () const |
| Returns name of class to which the object belongs. More... | |
| virtual void | Clear (Option_t *="") |
| virtual TObject * | Clone (const char *newname="") const |
| Make a clone of an object using the Streamer facility. More... | |
| virtual Int_t | Compare (const TObject *obj) const |
| Compare abstract method. More... | |
| virtual void | Copy (TObject &object) const |
| Copy this to obj. More... | |
| virtual void | Delete (Option_t *option="") |
| Delete this object. More... | |
| virtual Int_t | DistancetoPrimitive (Int_t px, Int_t py) |
| Computes distance from point (px,py) to the object. More... | |
| virtual void | Draw (Option_t *option="") |
| Default Draw method for all objects. More... | |
| virtual void | DrawClass () const |
| Draw class inheritance tree of the class to which this object belongs. More... | |
| virtual TObject * | DrawClone (Option_t *option="") const |
Draw a clone of this object in the current selected pad for instance with: gROOT->SetSelectedPad(gPad). More... | |
| virtual void | Dump () const |
| Dump contents of object on stdout. More... | |
| virtual void | Error (const char *method, const char *msgfmt,...) const |
| Issue error message. More... | |
| virtual void | Execute (const char *method, const char *params, Int_t *error=0) |
| Execute method on this object with the given parameter string, e.g. More... | |
| virtual void | Execute (TMethod *method, TObjArray *params, Int_t *error=0) |
| Execute method on this object with parameters stored in the TObjArray. More... | |
| virtual void | ExecuteEvent (Int_t event, Int_t px, Int_t py) |
| Execute action corresponding to an event at (px,py). More... | |
| virtual void | Fatal (const char *method, const char *msgfmt,...) const |
| Issue fatal error message. More... | |
| virtual TObject * | FindObject (const char *name) const |
| Must be redefined in derived classes. More... | |
| virtual TObject * | FindObject (const TObject *obj) const |
| Must be redefined in derived classes. More... | |
| virtual Option_t * | GetDrawOption () const |
| Get option used by the graphics system to draw this object. More... | |
| virtual const char * | GetIconName () const |
| Returns mime type name of object. More... | |
| virtual const char * | GetName () const |
| Returns name of object. More... | |
| virtual char * | GetObjectInfo (Int_t px, Int_t py) const |
| Returns string containing info about the object at position (px,py). More... | |
| virtual Option_t * | GetOption () const |
| virtual const char * | GetTitle () const |
| Returns title of object. More... | |
| virtual UInt_t | GetUniqueID () const |
| Return the unique object id. More... | |
| virtual Bool_t | HandleTimer (TTimer *timer) |
| Execute action in response of a timer timing out. More... | |
| virtual ULong_t | Hash () const |
| Return hash value for this object. More... | |
| Bool_t | HasInconsistentHash () const |
| Return true is the type of this object is known to have an inconsistent setup for Hash and RecursiveRemove (i.e. More... | |
| virtual void | Info (const char *method, const char *msgfmt,...) const |
| Issue info message. More... | |
| virtual Bool_t | InheritsFrom (const char *classname) const |
| Returns kTRUE if object inherits from class "classname". More... | |
| virtual Bool_t | InheritsFrom (const TClass *cl) const |
| Returns kTRUE if object inherits from TClass cl. More... | |
| virtual void | Inspect () const |
| Dump contents of this object in a graphics canvas. More... | |
| void | InvertBit (UInt_t f) |
| virtual Bool_t | IsEqual (const TObject *obj) const |
| Default equal comparison (objects are equal if they have the same address in memory). More... | |
| virtual Bool_t | IsFolder () const |
| Returns kTRUE in case object contains browsable objects (like containers or lists of other objects). More... | |
| R__ALWAYS_INLINE Bool_t | IsOnHeap () const |
| virtual Bool_t | IsSortable () const |
| R__ALWAYS_INLINE Bool_t | IsZombie () const |
| virtual void | ls (Option_t *option="") const |
| The ls function lists the contents of a class on stdout. More... | |
| void | MayNotUse (const char *method) const |
| Use this method to signal that a method (defined in a base class) may not be called in a derived class (in principle against good design since a child class should not provide less functionality than its parent, however, sometimes it is necessary). More... | |
| virtual Bool_t | Notify () |
| This method must be overridden to handle object notification. More... | |
| void | Obsolete (const char *method, const char *asOfVers, const char *removedFromVers) const |
| Use this method to declare a method obsolete. More... | |
| void | operator delete (void *ptr) |
| Operator delete. More... | |
| void | operator delete[] (void *ptr) |
| Operator delete []. More... | |
| void * | operator new (size_t sz) |
| void * | operator new (size_t sz, void *vp) |
| void * | operator new[] (size_t sz) |
| void * | operator new[] (size_t sz, void *vp) |
| TObject & | operator= (const TObject &rhs) |
| TObject assignment operator. More... | |
| virtual void | Paint (Option_t *option="") |
| This method must be overridden if a class wants to paint itself. More... | |
| virtual void | Pop () |
| Pop on object drawn in a pad to the top of the display list. More... | |
| virtual void | Print (Option_t *option="") const |
| This method must be overridden when a class wants to print itself. More... | |
| virtual Int_t | Read (const char *name) |
| Read contents of object with specified name from the current directory. More... | |
| virtual void | RecursiveRemove (TObject *obj) |
| Recursively remove this object from a list. More... | |
| void | ResetBit (UInt_t f) |
| virtual void | SaveAs (const char *filename="", Option_t *option="") const |
| Save this object in the file specified by filename. More... | |
| virtual void | SavePrimitive (std::ostream &out, Option_t *option="") |
| Save a primitive as a C++ statement(s) on output stream "out". More... | |
| void | SetBit (UInt_t f) |
| void | SetBit (UInt_t f, Bool_t set) |
| Set or unset the user status bits as specified in f. More... | |
| virtual void | SetDrawOption (Option_t *option="") |
| Set drawing option for object. More... | |
| virtual void | SetUniqueID (UInt_t uid) |
| Set the unique object id. More... | |
| virtual void | SysError (const char *method, const char *msgfmt,...) const |
| Issue system error message. More... | |
| R__ALWAYS_INLINE Bool_t | TestBit (UInt_t f) const |
| Int_t | TestBits (UInt_t f) const |
| virtual void | UseCurrentStyle () |
| Set current style settings in this object This function is called when either TCanvas::UseCurrentStyle or TROOT::ForceStyle have been invoked. More... | |
| virtual void | Warning (const char *method, const char *msgfmt,...) const |
| Issue warning message. More... | |
| virtual Int_t | Write (const char *name=0, Int_t option=0, Int_t bufsize=0) |
| Write this object to the current directory. More... | |
| virtual Int_t | Write (const char *name=0, Int_t option=0, Int_t bufsize=0) const |
| Write this object to the current directory. More... | |
Protected Member Functions | |
| Envelope (const TString &name, DataLoader *dataloader=nullptr, TFile *file=nullptr, const TString options="") | |
| timer to measute the time. More... | |
| DataInputHandler & | GetDataLoaderDataInput () |
| Utility method to get TMVA::DataInputHandler reference from the DataLoader. More... | |
| DataSetInfo & | GetDataLoaderDataSetInfo () |
| Utility method to get TMVA::DataSetInfo reference from the DataLoader. More... | |
| DataSetManager * | GetDataLoaderDataSetManager () |
| Utility method to get TMVA::DataSetManager pointer from the DataLoader. More... | |
| TDirectory * | RootBaseDir () |
| Utility method to get base dir directory from current file. More... | |
| void | WriteDataInformation (TMVA::DataSetInfo &fDataSetInfo, TMVA::Types::EAnalysisType fAnalysisType) |
| method to save Train/Test information into the output file. More... | |
Protected Member Functions inherited from TMVA::Configurable | |
| void | EnableLooseOptions (Bool_t b=kTRUE) |
| const TString & | GetReferenceFile () const |
| Bool_t | LooseOptionCheckingEnabled () const |
| void | ResetSetFlag () |
| resets the IsSet flag for all declare options to be called before options are read from stream More... | |
| void | WriteOptionsReferenceToFile () |
| write complete options to output stream More... | |
Protected Member Functions inherited from TObject | |
| virtual void | DoError (int level, const char *location, const char *fmt, va_list va) const |
| Interface to ErrorHandler (protected). More... | |
| void | MakeZombie () |
Protected Attributes | |
| std::shared_ptr< DataLoader > | fDataLoader |
| Booked method information. More... | |
| std::shared_ptr< TFile > | fFile |
| data More... | |
| UInt_t | fJobs |
| procpool object More... | |
| std::vector< OptionMap > | fMethods |
| Bool_t | fModelPersistence |
| file to save the results More... | |
| Bool_t | fSilentFile |
| List of transformations to test. More... | |
| TStopwatch | fTimer |
| number of jobs to run some high level algorithm in parallel More... | |
| TString | fTransformations |
| flag for extra information More... | |
| Bool_t | fVerbose |
| flag to save the trained model More... | |
| TProcPool | fWorkers |
| if true dont produce file output More... | |
Protected Attributes inherited from TMVA::Configurable | |
| MsgLogger * | fLogger |
Protected Attributes inherited from TNamed | |
| TString | fName |
| TString | fTitle |
Additional Inherited Members | |
Public Types inherited from TObject | |
| enum | { kIsOnHeap = 0x01000000 , kNotDeleted = 0x02000000 , kZombie = 0x04000000 , kInconsistent = 0x08000000 , kBitMask = 0x00ffffff } |
| enum | { kSingleKey = BIT(0) , kOverwrite = BIT(1) , kWriteDelete = BIT(2) } |
| enum | EDeprecatedStatusBits { kObjInCanvas = BIT(3) } |
| enum | EStatusBits { kCanDelete = BIT(0) , kMustCleanup = BIT(3) , kIsReferenced = BIT(4) , kHasUUID = BIT(5) , kCannotPick = BIT(6) , kNoContextMenu = BIT(8) , kInvalidObject = BIT(13) } |
Static Public Member Functions inherited from TObject | |
| static Long_t | GetDtorOnly () |
| Return destructor only flag. More... | |
| static Bool_t | GetObjectStat () |
| Get status of object stat flag. More... | |
| static void | SetDtorOnly (void *obj) |
| Set destructor only flag. More... | |
| static void | SetObjectStat (Bool_t stat) |
| Turn on/off tracking of objects in the TObjectTable. More... | |
#include <TMVA/Envelope.h>
|
protected |
timer to measute the time.
Constructor for the initialization of Envelopes, differents Envelopes may needs differents constructors then this is a generic one protected.
| name | the name algorithm. |
| dataloader | TMVA::DataLoader object with the data. |
| file | optional file to save the results. |
| options | extra options for the algorithm. |
Definition at line 45 of file Envelope.cxx.
| Envelope::~Envelope | ( | ) |
Default destructor.
Definition at line 67 of file Envelope.cxx.
|
virtual |
Method to book the machine learning method to perform the algorithm.
| methodname | String with the name of the mva method |
| methodtitle | String with the method title. |
| options | String with the options for the method. |
Definition at line 168 of file Envelope.cxx.
|
virtual |
Method to book the machine learning method to perform the algorithm.
| method | enum TMVA::Types::EMVA with the type of the mva method |
| methodtitle | String with the method title. |
| options | String with the options for the method. |
Definition at line 157 of file Envelope.cxx.
|
pure virtual |
Virtual method to be implemented with your algorithm.
Implemented in TMVA::Experimental::Classification, TMVA::CrossValidation, TMVA::HyperParameterOptimisation, and TMVA::VariableImportance.
| DataLoader * Envelope::GetDataLoader | ( | ) |
Method to get the pointer to TMVA::DataLoader object.
Definition at line 123 of file Envelope.cxx.
|
inlineprotected |
Utility method to get TMVA::DataInputHandler reference from the DataLoader.
Definition at line 96 of file Envelope.h.
|
inlineprotected |
Utility method to get TMVA::DataSetInfo reference from the DataLoader.
Definition at line 102 of file Envelope.h.
|
inlineprotected |
Utility method to get TMVA::DataSetManager pointer from the DataLoader.
Definition at line 108 of file Envelope.h.
| TFile * Envelope::GetFile | ( | ) |
Method to get the pointer to TFile object.
Definition at line 83 of file Envelope.cxx.
| std::vector< OptionMap > & Envelope::GetMethods | ( | ) |
Method get the Booked methods in a option map object.
Definition at line 112 of file Envelope.cxx.
function to check methods booked
| methodname | Method's name. |
| methodtitle | title associated to the method. |
Definition at line 225 of file Envelope.cxx.
| Bool_t TMVA::Envelope::IsModelPersistence | ( | ) |
Method to see if the algorithm model is saved in xml or serialized files.
Definition at line 141 of file Envelope.cxx.
| Bool_t Envelope::IsSilentFile | ( | ) |
Method to see if a file is available to save results.
Definition at line 76 of file Envelope.cxx.
| Bool_t Envelope::IsVerbose | ( | ) |
Method to see if the algorithm should print extra information.
Definition at line 98 of file Envelope.cxx.
|
virtual |
Method to parse the internal option string.
Reimplemented from TMVA::Configurable.
Reimplemented in TMVA::CrossValidation.
Definition at line 187 of file Envelope.cxx.
|
inlineprotected |
Utility method to get base dir directory from current file.
Definition at line 117 of file Envelope.h.
| void Envelope::SetDataLoader | ( | DataLoader * | dataloader | ) |
Method to set the pointer to TMVA::DataLoader object.
| dalaloader | pointer to TMVA::DataLoader object. |
Definition at line 131 of file Envelope.cxx.
Method to set the pointer to TFile object, with a writable file.
| file | pointer to TFile object. |
Definition at line 91 of file Envelope.cxx.
Method enable model persistence, then algorithms model is saved in xml or serialized files.
| status | Boolean with the status. |
Definition at line 148 of file Envelope.cxx.
Method enable print extra information in the algorithms.
| status | Boolean with the status. |
Definition at line 105 of file Envelope.cxx.
|
protected |
method to save Train/Test information into the output file.
| fDataSetInfo | TMVA::DataSetInfo object reference |
| fAnalysisType | Types::kMulticlass and Types::kRegression |
Definition at line 240 of file Envelope.cxx.
|
protected |
Booked method information.
Definition at line 47 of file Envelope.h.
|
protected |
data
Definition at line 48 of file Envelope.h.
|
protected |
procpool object
Definition at line 54 of file Envelope.h.
|
protected |
Definition at line 46 of file Envelope.h.
|
protected |
file to save the results
Definition at line 49 of file Envelope.h.
|
protected |
List of transformations to test.
Definition at line 52 of file Envelope.h.
|
protected |
number of jobs to run some high level algorithm in parallel
Definition at line 55 of file Envelope.h.
|
protected |
flag for extra information
Definition at line 51 of file Envelope.h.
|
protected |
flag to save the trained model
Definition at line 50 of file Envelope.h.
|
protected |
if true dont produce file output
Definition at line 53 of file Envelope.h.