Logo ROOT  
Reference Guide
 
Loading...
Searching...
No Matches
rf607_fitresult.py File Reference

Namespaces

namespace  rf607_fitresult
 

Detailed Description

View in nbviewer Open in SWAN
Likelihood and minimization: demonstration of options of the RooFitResult class

from __future__ import print_function
import ROOT
# Create pdf, data
# --------------------------------
# Declare observable x
x = ROOT.RooRealVar("x", "x", 0, 10)
# Create two Gaussian PDFs g1(x,mean1,sigma) anf g2(x,mean2,sigma) and
# their parameters
mean = ROOT.RooRealVar("mean", "mean of gaussians", 5, -10, 10)
sigma1 = ROOT.RooRealVar("sigma1", "width of gaussians", 0.5, 0.1, 10)
sigma2 = ROOT.RooRealVar("sigma2", "width of gaussians", 1, 0.1, 10)
sig1 = ROOT.RooGaussian("sig1", "Signal component 1", x, mean, sigma1)
sig2 = ROOT.RooGaussian("sig2", "Signal component 2", x, mean, sigma2)
# Build Chebychev polynomial pdf
a0 = ROOT.RooRealVar("a0", "a0", 0.5, 0.0, 1.0)
a1 = ROOT.RooRealVar("a1", "a1", -0.2)
bkg = ROOT.RooChebychev("bkg", "Background", x, [a0, a1])
# Sum the signal components into a composite signal pdf
sig1frac = ROOT.RooRealVar("sig1frac", "fraction of component 1 in signal", 0.8, 0.0, 1.0)
sig = ROOT.RooAddPdf("sig", "Signal", [sig1, sig2], [sig1frac])
# Sum the composite signal and background
bkgfrac = ROOT.RooRealVar("bkgfrac", "fraction of background", 0.5, 0.0, 1.0)
model = ROOT.RooAddPdf("model", "g1+g2+a", [bkg, sig], [bkgfrac])
# Generate 1000 events
data = model.generate({x}, 1000)
# Fit pdf to data, save fit result
# -------------------------------------------------------------
# Perform fit and save result
r = model.fitTo(data, Save=True, PrintLevel=-1)
# Print fit results
# ---------------------------------
# Summary printing: Basic info plus final values of floating fit parameters
r.Print()
# Verbose printing: Basic info, of constant parameters, and
# final values of floating parameters, correlations
r.Print("v")
# Visualize correlation matrix
# -------------------------------------------------------
# Construct 2D color plot of correlation matrix
ROOT.gStyle.SetOptStat(0)
ROOT.gStyle.SetPalette(1)
hcorr = r.correlationHist()
# Visualize ellipse corresponding to single correlation matrix element
frame = ROOT.RooPlot(sigma1, sig1frac, 0.45, 0.60, 0.65, 0.90)
frame.SetTitle("Covariance between sigma1 and sig1frac")
r.plotOn(frame, sigma1, sig1frac, "ME12ABHV")
# Access fit result information
# ---------------------------------------------------------
# Access basic information
print("EDM = ", r.edm())
print("-log(L) minimum = ", r.minNll())
# Access list of final fit parameter values
print("final value of floating parameters")
r.floatParsFinal().Print("s")
# Access correlation matrix elements
print("correlation between sig1frac and a0 is ", r.correlation(sig1frac, a0))
print("correlation between bkgfrac and mean is ", r.correlation("bkgfrac", "mean"))
# Extract covariance and correlation matrix as ROOT.TMatrixDSym
cor = r.correlationMatrix()
cov = r.covarianceMatrix()
# Print correlation, matrix
print("correlation matrix")
cor.Print()
print("covariance matrix")
cov.Print()
# Persist fit result in root file
# -------------------------------------------------------------
# Open ROOT file save save result
f = ROOT.TFile("rf607_fitresult.root", "RECREATE")
r.Write("rf607")
f.Close()
# In a clean ROOT session retrieve the persisted fit result as follows:
# r = gDirectory.Get("rf607")
c = ROOT.TCanvas("rf607_fitresult", "rf607_fitresult", 800, 400)
c.Divide(2)
c.cd(1)
ROOT.gPad.SetLeftMargin(0.15)
hcorr.GetYaxis().SetTitleOffset(1.4)
hcorr.Draw("colz")
c.cd(2)
ROOT.gPad.SetLeftMargin(0.15)
frame.GetYaxis().SetTitleOffset(1.6)
frame.Draw()
c.SaveAs("rf607_fitresult.png")
[#1] INFO:Minimization -- RooAbsMinimizerFcn::setOptimizeConst: activating const optimization
[#1] INFO:Minimization -- The following expressions will be evaluated in cache-and-track mode: (bkg,sig1,sig2)
[#1] INFO:Minimization -- RooAbsMinimizerFcn::setOptimizeConst: deactivating const optimization
RooFitResult: minimized FCN value: 1885.34, estimated distance to minimum: 0.000205499
covariance matrix quality: Full, accurate covariance matrix
Status : MINIMIZE=0 HESSE=0
Floating Parameter FinalValue +/- Error
-------------------- --------------------------
a0 7.2825e-01 +/- 1.11e-01
bkgfrac 4.3439e-01 +/- 8.36e-02
mean 5.0346e+00 +/- 3.36e-02
sig1frac 7.7835e-01 +/- 9.70e-02
sigma1 5.2340e-01 +/- 4.51e-02
sigma2 1.7767e+00 +/- 1.16e+00
RooFitResult: minimized FCN value: 1885.34, estimated distance to minimum: 0.000205499
covariance matrix quality: Full, accurate covariance matrix
Status : MINIMIZE=0 HESSE=0
Constant Parameter Value
-------------------- ------------
a1 -2.0000e-01
Floating Parameter InitialValue FinalValue +/- Error GblCorr.
-------------------- ------------ -------------------------- --------
a0 5.0000e-01 7.2825e-01 +/- 1.11e-01 <none>
bkgfrac 5.0000e-01 4.3439e-01 +/- 8.36e-02 <none>
mean 5.0000e+00 5.0346e+00 +/- 3.36e-02 <none>
sig1frac 8.0000e-01 7.7835e-01 +/- 9.70e-02 <none>
sigma1 5.0000e-01 5.2340e-01 +/- 4.51e-02 <none>
sigma2 1.0000e+00 1.7767e+00 +/- 1.16e+00 <none>
1) RooRealVar:: a0 = 0.728245 +/- 0.111109
2) RooRealVar:: bkgfrac = 0.434386 +/- 0.0836079
3) RooRealVar:: mean = 5.03463 +/- 0.0336219
4) RooRealVar:: sig1frac = 0.778347 +/- 0.0969912
5) RooRealVar:: sigma1 = 0.523396 +/- 0.0451307
6) RooRealVar:: sigma2 = 1.77668 +/- 1.15533
6x6 matrix is as follows
| 0 | 1 | 2 | 3 | 4 |
----------------------------------------------------------------------
0 | 1 -0.7952 -0.02552 -0.3779 0.4111
1 | -0.7952 1 -0.05102 0.6023 -0.3876
2 | -0.02552 -0.05102 1 -0.0873 -0.04206
3 | -0.3779 0.6023 -0.0873 1 0.2966
4 | 0.4111 -0.3876 -0.04206 0.2966 1
5 | 0.8272 -0.8708 0.01245 -0.2609 0.5799
| 5 |
----------------------------------------------------------------------
0 | 0.8272
1 | -0.8708
2 | 0.01245
3 | -0.2609
4 | 0.5799
5 | 1
6x6 matrix is as follows
| 0 | 1 | 2 | 3 | 4 |
----------------------------------------------------------------------
0 | 0.01261 -0.007502 -9.635e-05 -0.004154 0.002084
1 | -0.007502 0.007058 -0.0001441 0.004954 -0.00147
2 | -9.635e-05 -0.0001441 0.00113 -0.0002873 -6.383e-05
3 | -0.004154 0.004954 -0.0002873 0.009583 0.00131
4 | 0.002084 -0.00147 -6.383e-05 0.00131 0.002037
5 | 0.1091 -0.08595 0.0004916 -0.03 0.03075
| 5 |
----------------------------------------------------------------------
0 | 0.1091
1 | -0.08595
2 | 0.0004916
3 | -0.03
4 | 0.03075
5 | 1.38
EDM = 0.00020549915143065197
-log(L) minimum = 1885.343815305069
final value of floating parameters
correlation between sig1frac and a0 is -0.3778511951671703
correlation between bkgfrac and mean is -0.05102316430532121
correlation matrix
covariance matrix
Date
February 2018
Authors
Clemens Lange, Wouter Verkerke (C++ version)

Definition in file rf607_fitresult.py.