ROOT 6.14/05 Reference Guide |
HybridCalculatorOriginal class.
This class is deprecated and it is replaced by the HybridCalculator.
This is a fresh rewrite in RooStats of RooStatsCms/LimitCalculator
developed by D. Piparo and G. Schott - Universitaet Karlsruhe
The class is born from the need to have an implementation of the CLs method that could take advantage from the RooFit Package. The basic idea is the following:
The class allows the user to input models as RooAbsPdf ( TH1 object could be used by using the RooHistPdf class)
The pdfs must be "extended": for more information please refer to http://roofit.sourceforge.net). The dataset can be entered as a RooAbsData objects.
Unlike the TLimit Class a complete MC generation is performed at each step and not a simple Poisson fluctuation of the contents of the bins. Another innovation is the treatment of the nuisance parameters. The user can input in the constructor nuisance parameters. To include the information that we have about the nuisance parameters a prior PDF (RooAbsPdf) should be specified
Different test statistic can be used (likelihood ratio, number of events or profile likelihood ratio. The default is the likelihood ratio. See the method SetTestStatistic.
The number of toys to be generated is controlled by SetNumberOfToys(n).
The result of the calculations is returned as a HybridResult object pointer.
see also the following interesting references:
Definition at line 34 of file HybridCalculatorOriginal.h.
Public Member Functions | |
HybridCalculatorOriginal (const char *name=0) | |
Dummy Constructor with only name. More... | |
HybridCalculatorOriginal (RooAbsPdf &sb_model, RooAbsPdf &b_model, RooArgList &observables, const RooArgSet *nuisance_parameters=0, RooAbsPdf *prior_pdf=0, bool GenerateBinned=false, int testStatistics=1, int ntoys=1000) | |
Constructor for HybridCalculator from pdf instances but without a data-set. More... | |
HybridCalculatorOriginal (RooAbsData &data, RooAbsPdf &sb_model, RooAbsPdf &b_model, const RooArgSet *nuisance_parameters=0, RooAbsPdf *prior_pdf=0, bool GenerateBinned=false, int testStatistics=1, int ntoys=1000) | |
Constructor for HybridCalculator using a data set and pdf instances. More... | |
HybridCalculatorOriginal (RooAbsData &data, const ModelConfig &sb_model, const ModelConfig &b_model, bool GenerateBinned=false, int testStatistics=1, int ntoys=1000) | |
Constructor passing a ModelConfig for the SBmodel and a ModelConfig for the B Model. More... | |
virtual | ~HybridCalculatorOriginal () |
Destructor of HybridCalculator. More... | |
HybridResult * | Calculate (TH1 &data, unsigned int nToys, bool usePriors) const |
first compute the test statistics for data and then prepare and run the toy-MC experiments More... | |
HybridResult * | Calculate (RooAbsData &data, unsigned int nToys, bool usePriors) const |
first compute the test statistics for data and then prepare and run the toy-MC experiments More... | |
HybridResult * | Calculate (unsigned int nToys, bool usePriors) const |
virtual HybridResult * | GetHypoTest () const |
inherited methods from HypoTestCalculator interface More... | |
unsigned int | GetNumberOfToys () const |
void | PatchSetExtended (bool on=true) |
void | PrintMore (const char *options) const |
Print out some information about the input models. More... | |
virtual void | SetAlternateModel (const ModelConfig &) |
Set the model describing the alternate hypothesis. More... | |
virtual void | SetAlternateParameters (const RooArgSet &) |
virtual void | SetAlternatePdf (RooAbsPdf &pdf) |
virtual void | SetCommonPdf (RooAbsPdf &pdf) |
virtual void | SetData (RooAbsData &data) |
void | SetGenerateBinned (bool on=true) |
void | SetNuisanceParameters (const RooArgSet ¶ms) |
void | SetNuisancePdf (RooAbsPdf &prior_pdf) |
virtual void | SetNullModel (const ModelConfig &) |
Set the model describing the null hypothesis. More... | |
virtual void | SetNullParameters (const RooArgSet &) |
virtual void | SetNullPdf (RooAbsPdf &pdf) |
void | SetNumberOfToys (unsigned int ntoys) |
void | SetTestStatistic (int index) |
set the desired test statistics: index=1 : 2 * log( L_sb / L_b ) (DEFAULT) index=2 : number of generated events index=3 : profiled likelihood ratio if the index is different to any of those values, the default is used More... | |
void | UseNuisance (bool on=true) |
Public Member Functions inherited from RooStats::HypoTestCalculator | |
virtual | ~HypoTestCalculator () |
virtual void | SetCommonModel (const ModelConfig &model) |
Public Member Functions inherited from TNamed | |
TNamed () | |
TNamed (const char *name, const char *title) | |
TNamed (const TString &name, const TString &title) | |
TNamed (const TNamed &named) | |
TNamed copy ctor. More... | |
virtual | ~TNamed () |
TNamed destructor. More... | |
virtual void | Clear (Option_t *option="") |
Set name and title to empty strings (""). More... | |
virtual TObject * | Clone (const char *newname="") const |
Make a clone of an object using the Streamer facility. More... | |
virtual Int_t | Compare (const TObject *obj) const |
Compare two TNamed objects. More... | |
virtual void | Copy (TObject &named) const |
Copy this to obj. More... | |
virtual void | FillBuffer (char *&buffer) |
Encode TNamed into output buffer. More... | |
virtual const char * | GetName () const |
Returns name of object. More... | |
virtual const char * | GetTitle () const |
Returns title of object. More... | |
virtual ULong_t | Hash () const |
Return hash value for this object. More... | |
virtual Bool_t | IsSortable () const |
virtual void | ls (Option_t *option="") const |
List TNamed name and title. More... | |
TNamed & | operator= (const TNamed &rhs) |
TNamed assignment operator. More... | |
virtual void | Print (Option_t *option="") const |
Print TNamed name and title. More... | |
virtual void | SetName (const char *name) |
Set the name of the TNamed. More... | |
virtual void | SetNameTitle (const char *name, const char *title) |
Set all the TNamed parameters (name and title). More... | |
virtual void | SetTitle (const char *title="") |
Set the title of the TNamed. More... | |
virtual Int_t | Sizeof () const |
Return size of the TNamed part of the TObject. More... | |
Public Member Functions inherited from TObject | |
TObject () | |
TObject constructor. More... | |
TObject (const TObject &object) | |
TObject copy ctor. More... | |
virtual | ~TObject () |
TObject destructor. More... | |
void | AbstractMethod (const char *method) const |
Use this method to implement an "abstract" method that you don't want to leave purely abstract. More... | |
virtual void | AppendPad (Option_t *option="") |
Append graphics object to current pad. More... | |
virtual void | Browse (TBrowser *b) |
Browse object. May be overridden for another default action. More... | |
ULong_t | CheckedHash () |
Checked and record whether for this class has a consistent Hash/RecursiveRemove setup (*) and then return the regular Hash value for this object. More... | |
virtual const char * | ClassName () const |
Returns name of class to which the object belongs. More... | |
virtual void | Delete (Option_t *option="") |
Delete this object. More... | |
virtual Int_t | DistancetoPrimitive (Int_t px, Int_t py) |
Computes distance from point (px,py) to the object. More... | |
virtual void | Draw (Option_t *option="") |
Default Draw method for all objects. More... | |
virtual void | DrawClass () const |
Draw class inheritance tree of the class to which this object belongs. More... | |
virtual TObject * | DrawClone (Option_t *option="") const |
Draw a clone of this object in the current selected pad for instance with: gROOT->SetSelectedPad(gPad) . More... | |
virtual void | Dump () const |
Dump contents of object on stdout. More... | |
virtual void | Error (const char *method, const char *msgfmt,...) const |
Issue error message. More... | |
virtual void | Execute (const char *method, const char *params, Int_t *error=0) |
Execute method on this object with the given parameter string, e.g. More... | |
virtual void | Execute (TMethod *method, TObjArray *params, Int_t *error=0) |
Execute method on this object with parameters stored in the TObjArray. More... | |
virtual void | ExecuteEvent (Int_t event, Int_t px, Int_t py) |
Execute action corresponding to an event at (px,py). More... | |
virtual void | Fatal (const char *method, const char *msgfmt,...) const |
Issue fatal error message. More... | |
virtual TObject * | FindObject (const char *name) const |
Must be redefined in derived classes. More... | |
virtual TObject * | FindObject (const TObject *obj) const |
Must be redefined in derived classes. More... | |
virtual Option_t * | GetDrawOption () const |
Get option used by the graphics system to draw this object. More... | |
virtual const char * | GetIconName () const |
Returns mime type name of object. More... | |
virtual char * | GetObjectInfo (Int_t px, Int_t py) const |
Returns string containing info about the object at position (px,py). More... | |
virtual Option_t * | GetOption () const |
virtual UInt_t | GetUniqueID () const |
Return the unique object id. More... | |
virtual Bool_t | HandleTimer (TTimer *timer) |
Execute action in response of a timer timing out. More... | |
Bool_t | HasInconsistentHash () const |
Return true is the type of this object is known to have an inconsistent setup for Hash and RecursiveRemove (i.e. More... | |
virtual void | Info (const char *method, const char *msgfmt,...) const |
Issue info message. More... | |
virtual Bool_t | InheritsFrom (const char *classname) const |
Returns kTRUE if object inherits from class "classname". More... | |
virtual Bool_t | InheritsFrom (const TClass *cl) const |
Returns kTRUE if object inherits from TClass cl. More... | |
virtual void | Inspect () const |
Dump contents of this object in a graphics canvas. More... | |
void | InvertBit (UInt_t f) |
virtual Bool_t | IsEqual (const TObject *obj) const |
Default equal comparison (objects are equal if they have the same address in memory). More... | |
virtual Bool_t | IsFolder () const |
Returns kTRUE in case object contains browsable objects (like containers or lists of other objects). More... | |
R__ALWAYS_INLINE Bool_t | IsOnHeap () const |
R__ALWAYS_INLINE Bool_t | IsZombie () const |
void | MayNotUse (const char *method) const |
Use this method to signal that a method (defined in a base class) may not be called in a derived class (in principle against good design since a child class should not provide less functionality than its parent, however, sometimes it is necessary). More... | |
virtual Bool_t | Notify () |
This method must be overridden to handle object notification. More... | |
void | Obsolete (const char *method, const char *asOfVers, const char *removedFromVers) const |
Use this method to declare a method obsolete. More... | |
void | operator delete (void *ptr) |
Operator delete. More... | |
void | operator delete[] (void *ptr) |
Operator delete []. More... | |
void * | operator new (size_t sz) |
void * | operator new (size_t sz, void *vp) |
void * | operator new[] (size_t sz) |
void * | operator new[] (size_t sz, void *vp) |
TObject & | operator= (const TObject &rhs) |
TObject assignment operator. More... | |
virtual void | Paint (Option_t *option="") |
This method must be overridden if a class wants to paint itself. More... | |
virtual void | Pop () |
Pop on object drawn in a pad to the top of the display list. More... | |
virtual Int_t | Read (const char *name) |
Read contents of object with specified name from the current directory. More... | |
virtual void | RecursiveRemove (TObject *obj) |
Recursively remove this object from a list. More... | |
void | ResetBit (UInt_t f) |
virtual void | SaveAs (const char *filename="", Option_t *option="") const |
Save this object in the file specified by filename. More... | |
virtual void | SavePrimitive (std::ostream &out, Option_t *option="") |
Save a primitive as a C++ statement(s) on output stream "out". More... | |
void | SetBit (UInt_t f, Bool_t set) |
Set or unset the user status bits as specified in f. More... | |
void | SetBit (UInt_t f) |
virtual void | SetDrawOption (Option_t *option="") |
Set drawing option for object. More... | |
virtual void | SetUniqueID (UInt_t uid) |
Set the unique object id. More... | |
virtual void | SysError (const char *method, const char *msgfmt,...) const |
Issue system error message. More... | |
R__ALWAYS_INLINE Bool_t | TestBit (UInt_t f) const |
Int_t | TestBits (UInt_t f) const |
virtual void | UseCurrentStyle () |
Set current style settings in this object This function is called when either TCanvas::UseCurrentStyle or TROOT::ForceStyle have been invoked. More... | |
virtual void | Warning (const char *method, const char *msgfmt,...) const |
Issue warning message. More... | |
virtual Int_t | Write (const char *name=0, Int_t option=0, Int_t bufsize=0) |
Write this object to the current directory. More... | |
virtual Int_t | Write (const char *name=0, Int_t option=0, Int_t bufsize=0) const |
Write this object to the current directory. More... | |
Private Member Functions | |
bool | DoCheckInputs () const |
void | RunToys (std::vector< double > &bVals, std::vector< double > &sbVals, unsigned int nToys, bool usePriors) const |
do the actual run-MC processing More... | |
Private Attributes | |
RooAbsPdf * | fBModel |
RooAbsData * | fData |
bool | fGenerateBinned |
unsigned int | fNToys |
const RooArgSet * | fNuisanceParameters |
RooArgList * | fObservables |
RooAbsPdf * | fPriorPdf |
RooAbsPdf * | fSbModel |
unsigned int | fTestStatisticsIdx |
bool | fTmpDoExtended |
bool | fUsePriorPdf |
Additional Inherited Members | |
Public Types inherited from TObject | |
enum | { kIsOnHeap = 0x01000000, kNotDeleted = 0x02000000, kZombie = 0x04000000, kInconsistent = 0x08000000, kBitMask = 0x00ffffff } |
enum | { kSingleKey = BIT(0), kOverwrite = BIT(1), kWriteDelete = BIT(2) } |
enum | EDeprecatedStatusBits { kObjInCanvas = BIT(3) } |
enum | EStatusBits { kCanDelete = BIT(0), kMustCleanup = BIT(3), kIsReferenced = BIT(4), kHasUUID = BIT(5), kCannotPick = BIT(6), kNoContextMenu = BIT(8), kInvalidObject = BIT(13) } |
Static Public Member Functions inherited from TObject | |
static Long_t | GetDtorOnly () |
Return destructor only flag. More... | |
static Bool_t | GetObjectStat () |
Get status of object stat flag. More... | |
static void | SetDtorOnly (void *obj) |
Set destructor only flag. More... | |
static void | SetObjectStat (Bool_t stat) |
Turn on/off tracking of objects in the TObjectTable. More... | |
Protected Member Functions inherited from TObject | |
virtual void | DoError (int level, const char *location, const char *fmt, va_list va) const |
Interface to ErrorHandler (protected). More... | |
void | MakeZombie () |
Protected Attributes inherited from TNamed | |
TString | fName |
TString | fTitle |
#include <RooStats/HybridCalculatorOriginal.h>
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explicit |
Dummy Constructor with only name.
constructor with name and title
Definition at line 93 of file HybridCalculatorOriginal.cxx.
HybridCalculatorOriginal::HybridCalculatorOriginal | ( | RooAbsPdf & | sb_model, |
RooAbsPdf & | b_model, | ||
RooArgList & | observables, | ||
const RooArgSet * | nuisance_parameters = 0 , |
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RooAbsPdf * | prior_pdf = 0 , |
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bool | GenerateBinned = false , |
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int | testStatistics = 1 , |
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int | ntoys = 1000 |
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Constructor for HybridCalculator from pdf instances but without a data-set.
HybridCalculatorOriginal constructor without specifying a data set the user need to specify the models in the S+B case and B-only case, the list of observables of the model(s) (for MC-generation), the list of parameters that are marginalised and the prior distribution of those parameters.
Definition at line 115 of file HybridCalculatorOriginal.cxx.
HybridCalculatorOriginal::HybridCalculatorOriginal | ( | RooAbsData & | data, |
RooAbsPdf & | sbModel, | ||
RooAbsPdf & | bModel, | ||
const RooArgSet * | nuisance_parameters = 0 , |
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RooAbsPdf * | priorPdf = 0 , |
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bool | GenerateBinned = false , |
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int | testStatistics = 1 , |
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int | numToys = 1000 |
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) |
Constructor for HybridCalculator using a data set and pdf instances.
HybridCalculatorOriginal constructor for performing hypotesis test the user need to specify the data set, the models in the S+B case and B-only case.
In case of treatment of nuisance parameter, the user need to specify the the list of parameters that are marginalised and the prior distribution of those parameters
Definition at line 156 of file HybridCalculatorOriginal.cxx.
HybridCalculatorOriginal::HybridCalculatorOriginal | ( | RooAbsData & | data, |
const ModelConfig & | sbModel, | ||
const ModelConfig & | bModel, | ||
bool | GenerateBinned = false , |
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int | testStatistics = 1 , |
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int | numToys = 1000 |
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) |
Constructor passing a ModelConfig for the SBmodel and a ModelConfig for the B Model.
Constructor with a ModelConfig object representing the signal + background model and another model config representig the background only model a Prior pdf for the nuiscane parameter of the signal and background can be specified in the s+b model or the b model.
If it is specified in the s+b model, the one of the s+b model will be used
Definition at line 188 of file HybridCalculatorOriginal.cxx.
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virtual |
Destructor of HybridCalculator.
HybridCalculatorOriginal destructor.
Definition at line 214 of file HybridCalculatorOriginal.cxx.
HybridResult * HybridCalculatorOriginal::Calculate | ( | TH1 & | data, |
unsigned int | nToys, | ||
bool | usePriors | ||
) | const |
first compute the test statistics for data and then prepare and run the toy-MC experiments
Definition at line 255 of file HybridCalculatorOriginal.cxx.
HybridResult * HybridCalculatorOriginal::Calculate | ( | RooAbsData & | data, |
unsigned int | nToys, | ||
bool | usePriors | ||
) | const |
first compute the test statistics for data and then prepare and run the toy-MC experiments
Definition at line 270 of file HybridCalculatorOriginal.cxx.
HybridResult * HybridCalculatorOriginal::Calculate | ( | unsigned int | nToys, |
bool | usePriors | ||
) | const |
Definition at line 324 of file HybridCalculatorOriginal.cxx.
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private |
Definition at line 596 of file HybridCalculatorOriginal.cxx.
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virtual |
inherited methods from HypoTestCalculator interface
implementation of inherited methods from HypoTestCalculator
Implements RooStats::HypoTestCalculator.
Definition at line 581 of file HybridCalculatorOriginal.cxx.
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inline |
Definition at line 112 of file HybridCalculatorOriginal.h.
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inline |
Definition at line 132 of file HybridCalculatorOriginal.h.
void HybridCalculatorOriginal::PrintMore | ( | const char * | options | ) | const |
Print out some information about the input models.
Definition at line 547 of file HybridCalculatorOriginal.cxx.
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private |
do the actual run-MC processing
Definition at line 349 of file HybridCalculatorOriginal.cxx.
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virtual |
Set the model describing the alternate hypothesis.
Implements RooStats::HypoTestCalculator.
Definition at line 233 of file HybridCalculatorOriginal.cxx.
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inlinevirtual |
Definition at line 96 of file HybridCalculatorOriginal.h.
Definition at line 88 of file HybridCalculatorOriginal.h.
Definition at line 84 of file HybridCalculatorOriginal.h.
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inlinevirtual |
Implements RooStats::HypoTestCalculator.
Definition at line 91 of file HybridCalculatorOriginal.h.
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inline |
Definition at line 118 of file HybridCalculatorOriginal.h.
Definition at line 106 of file HybridCalculatorOriginal.h.
Definition at line 100 of file HybridCalculatorOriginal.h.
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virtual |
Set the model describing the null hypothesis.
Implements RooStats::HypoTestCalculator.
Definition at line 222 of file HybridCalculatorOriginal.cxx.
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inlinevirtual |
Definition at line 94 of file HybridCalculatorOriginal.h.
Definition at line 86 of file HybridCalculatorOriginal.h.
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inline |
Definition at line 109 of file HybridCalculatorOriginal.h.
void HybridCalculatorOriginal::SetTestStatistic | ( | int | index | ) |
set the desired test statistics: index=1 : 2 * log( L_sb / L_b ) (DEFAULT) index=2 : number of generated events index=3 : profiled likelihood ratio if the index is different to any of those values, the default is used
set the desired test statistics:
Definition at line 247 of file HybridCalculatorOriginal.cxx.
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inline |
Definition at line 115 of file HybridCalculatorOriginal.h.
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Definition at line 144 of file HybridCalculatorOriginal.h.
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Definition at line 148 of file HybridCalculatorOriginal.h.
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private |
Definition at line 149 of file HybridCalculatorOriginal.h.
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private |
Definition at line 142 of file HybridCalculatorOriginal.h.
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private |
Definition at line 146 of file HybridCalculatorOriginal.h.
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mutableprivate |
Definition at line 145 of file HybridCalculatorOriginal.h.
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private |
Definition at line 147 of file HybridCalculatorOriginal.h.
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private |
Definition at line 143 of file HybridCalculatorOriginal.h.
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private |
Definition at line 141 of file HybridCalculatorOriginal.h.
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Definition at line 151 of file HybridCalculatorOriginal.h.
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private |
Definition at line 150 of file HybridCalculatorOriginal.h.