ROOT » TMVA » TMVA::MethodSVM

class TMVA::MethodSVM: public TMVA::MethodBase


 SMO Platt's SVM classifier with Keerthi & Shavade improvements

Function Members (Methods)

public:
virtual~MethodSVM()
voidTObject::AbstractMethod(const char* method) const
voidTMVA::Configurable::AddOptionsXMLTo(void* parent) const
voidTMVA::MethodBase::AddOutput(TMVA::Types::ETreeType type, TMVA::Types::EAnalysisType analysisType)
virtual voidAddWeightsXMLTo(void* parent) const
virtual voidTObject::AppendPad(Option_t* option = "")
TDirectory*TMVA::MethodBase::BaseDir() const
virtual voidTObject::Browse(TBrowser* b)
voidTMVA::Configurable::CheckForUnusedOptions() const
virtual voidTMVA::MethodBase::CheckSetup()
static TClass*Class()
virtual const char*TObject::ClassName() const
virtual voidTObject::Clear(Option_t* = "")
virtual TObject*TObject::Clone(const char* newname = "") const
virtual Int_tTObject::Compare(const TObject* obj) const
TMVA::ConfigurableTMVA::Configurable::Configurable(const TString& theOption = "")
TMVA::ConfigurableTMVA::Configurable::Configurable(const TMVA::Configurable&)
virtual voidTObject::Copy(TObject& object) const
virtual const TMVA::Ranking*CreateRanking()
TMVA::DataSet*TMVA::MethodBase::Data() const
TMVA::DataSetInfo&TMVA::MethodBase::DataInfo() const
virtual voidTObject::Delete(Option_t* option = "")MENU
voidTMVA::MethodBase::DisableWriting(Bool_t setter)
virtual Int_tTObject::DistancetoPrimitive(Int_t px, Int_t py)
Bool_tTMVA::MethodBase::DoMulticlass() const
Bool_tTMVA::MethodBase::DoRegression() const
virtual voidTObject::Draw(Option_t* option = "")
virtual voidTObject::DrawClass() constMENU
virtual TObject*TObject::DrawClone(Option_t* option = "") constMENU
virtual voidTObject::Dump() constMENU
virtual voidTObject::Error(const char* method, const char* msgfmt) const
virtual voidTObject::Execute(const char* method, const char* params, Int_t* error = 0)
virtual voidTObject::Execute(TMethod* method, TObjArray* params, Int_t* error = 0)
virtual voidTObject::ExecuteEvent(Int_t event, Int_t px, Int_t py)
virtual voidTObject::Fatal(const char* method, const char* msgfmt) const
virtual TObject*TObject::FindObject(const char* name) const
virtual TObject*TObject::FindObject(const TObject* obj) const
TMVA::Types::EAnalysisTypeTMVA::MethodBase::GetAnalysisType() const
const char*TMVA::Configurable::GetConfigDescription() const
const char*TMVA::Configurable::GetConfigName() const
virtual Option_t*TObject::GetDrawOption() const
static Long_tTObject::GetDtorOnly()
virtual Double_tTMVA::MethodBase::GetEfficiency(const TString&, TMVA::Types::ETreeType, Double_t& err)
const TMVA::Event*TMVA::MethodBase::GetEvent() const
const TMVA::Event*TMVA::MethodBase::GetEvent(const TMVA::Event* ev) const
const TMVA::Event*TMVA::MethodBase::GetEvent(Long64_t ievt) const
const TMVA::Event*TMVA::MethodBase::GetEvent(Long64_t ievt, TMVA::Types::ETreeType type) const
const vector<TMVA::Event*>&TMVA::MethodBase::GetEventCollection(TMVA::Types::ETreeType type)
virtual const char*TObject::GetIconName() const
const TString&TMVA::MethodBase::GetInputLabel(Int_t i) const
const TString&TMVA::MethodBase::GetInputTitle(Int_t i) const
const TString&TMVA::MethodBase::GetInputVar(Int_t i) const
const TString&TMVA::MethodBase::GetJobName() const
virtual Double_tTMVA::MethodBase::GetKSTrainingVsTest(Char_t SorB, TString opt = "X")
virtual Double_tTMVA::MethodBase::GetMaximumSignificance(Double_t SignalEvents, Double_t BackgroundEvents, Double_t& optimal_significance_value) const
Double_tTMVA::MethodBase::GetMean(Int_t ivar) const
const TString&TMVA::MethodBase::GetMethodName() const
TMVA::Types::EMVATMVA::MethodBase::GetMethodType() const
TStringTMVA::MethodBase::GetMethodTypeName() const
virtual vector<Float_t>TMVA::MethodBase::GetMulticlassEfficiency(vector<vector<Float_t> >& purity)
virtual vector<Float_t>TMVA::MethodBase::GetMulticlassTrainingEfficiency(vector<vector<Float_t> >& purity)
virtual const vector<Float_t>&TMVA::MethodBase::GetMulticlassValues()
virtual Double_tGetMvaValue(Double_t* err = 0, Double_t* errUpper = 0)
virtual const char*TMVA::MethodBase::GetName() const
UInt_tTMVA::MethodBase::GetNEvents() const
UInt_tTMVA::MethodBase::GetNTargets() const
UInt_tTMVA::MethodBase::GetNvar() const
UInt_tTMVA::MethodBase::GetNVariables() const
virtual char*TObject::GetObjectInfo(Int_t px, Int_t py) const
static Bool_tTObject::GetObjectStat()
virtual Option_t*TObject::GetOption() const
const TString&TMVA::Configurable::GetOptions() const
virtual Double_tTMVA::MethodBase::GetProba(const TMVA::Event* ev)
virtual Double_tTMVA::MethodBase::GetProba(Double_t mvaVal, Double_t ap_sig)
const TStringTMVA::MethodBase::GetProbaName() const
virtual Double_tTMVA::MethodBase::GetRarity(Double_t mvaVal, TMVA::Types::ESBType reftype = Types::kBackground) const
virtual voidTMVA::MethodBase::GetRegressionDeviation(UInt_t tgtNum, TMVA::Types::ETreeType type, Double_t& stddev, Double_t& stddev90Percent) const
virtual const vector<Float_t>&GetRegressionValues()
Double_tTMVA::MethodBase::GetRMS(Int_t ivar) const
virtual Double_tTMVA::MethodBase::GetROCIntegral(TH1D* histS, TH1D* histB) const
virtual Double_tTMVA::MethodBase::GetROCIntegral(TMVA::PDF* pdfS = 0, TMVA::PDF* pdfB = 0) const
virtual Double_tTMVA::MethodBase::GetSeparation(TH1*, TH1*) const
virtual Double_tTMVA::MethodBase::GetSeparation(TMVA::PDF* pdfS = 0, TMVA::PDF* pdfB = 0) const
Double_tTMVA::MethodBase::GetSignalReferenceCut() const
Double_tTMVA::MethodBase::GetSignalReferenceCutOrientation() const
virtual Double_tTMVA::MethodBase::GetSignificance() const
const TMVA::Event*TMVA::MethodBase::GetTestingEvent(Long64_t ievt) const
Double_tTMVA::MethodBase::GetTestTime() const
const TString&TMVA::MethodBase::GetTestvarName() const
virtual const char*TObject::GetTitle() const
virtual Double_tTMVA::MethodBase::GetTrainingEfficiency(const TString&)
const TMVA::Event*TMVA::MethodBase::GetTrainingEvent(Long64_t ievt) const
UInt_tTMVA::MethodBase::GetTrainingROOTVersionCode() const
TStringTMVA::MethodBase::GetTrainingROOTVersionString() const
UInt_tTMVA::MethodBase::GetTrainingTMVAVersionCode() const
TStringTMVA::MethodBase::GetTrainingTMVAVersionString() const
Double_tTMVA::MethodBase::GetTrainTime() const
TMVA::TransformationHandler&TMVA::MethodBase::GetTransformationHandler(Bool_t takeReroutedIfAvailable = true)
const TMVA::TransformationHandler&TMVA::MethodBase::GetTransformationHandler(Bool_t takeReroutedIfAvailable = true) const
virtual UInt_tTObject::GetUniqueID() const
TStringTMVA::MethodBase::GetWeightFileName() const
Double_tTMVA::MethodBase::GetXmax(Int_t ivar) const
Double_tTMVA::MethodBase::GetXmin(Int_t ivar) const
virtual Bool_tTObject::HandleTimer(TTimer* timer)
virtual Bool_tHasAnalysisType(TMVA::Types::EAnalysisType type, UInt_t numberClasses, UInt_t numberTargets)
virtual ULong_tTObject::Hash() const
Bool_tTMVA::MethodBase::HasMVAPdfs() const
TMVA::IMethodTMVA::IMethod::IMethod()
TMVA::IMethodTMVA::IMethod::IMethod(const TMVA::IMethod&)
virtual voidTObject::Info(const char* method, const char* msgfmt) const
virtual Bool_tTObject::InheritsFrom(const char* classname) const
virtual Bool_tTObject::InheritsFrom(const TClass* cl) const
virtual voidInit()
virtual voidTObject::Inspect() constMENU
voidTObject::InvertBit(UInt_t f)
virtual TClass*IsA() const
virtual Bool_tTObject::IsEqual(const TObject* obj) const
virtual Bool_tTObject::IsFolder() const
Bool_tTObject::IsOnHeap() const
virtual Bool_tTMVA::MethodBase::IsSignalLike()
virtual Bool_tTMVA::MethodBase::IsSignalLike(Double_t mvaVal)
virtual Bool_tTObject::IsSortable() const
Bool_tTObject::IsZombie() const
virtual voidTObject::ls(Option_t* option = "") const
virtual voidTMVA::MethodBase::MakeClass(const TString& classFileName = TString("")) const
voidTObject::MayNotUse(const char* method) const
TMVA::MethodBaseTMVA::MethodBase::MethodBase(const TMVA::MethodBase&)
TMVA::MethodBaseTMVA::MethodBase::MethodBase(TMVA::Types::EMVA methodType, TMVA::DataSetInfo& dsi, const TString& weightFile, TDirectory* theBaseDir = 0)
TMVA::MethodBaseTMVA::MethodBase::MethodBase(const TString& jobName, TMVA::Types::EMVA methodType, const TString& methodTitle, TMVA::DataSetInfo& dsi, const TString& theOption = "", TDirectory* theBaseDir = 0)
TDirectory*TMVA::MethodBase::MethodBaseDir() const
TMVA::MethodSVMMethodSVM(const TMVA::MethodSVM&)
TMVA::MethodSVMMethodSVM(TMVA::DataSetInfo& theData, const TString& theWeightFile, TDirectory* theTargetDir = __null)
TMVA::MethodSVMMethodSVM(const TString& jobName, const TString& methodTitle, TMVA::DataSetInfo& theData, const TString& theOption = "", TDirectory* theTargetDir = 0)
virtual Bool_tTObject::Notify()
voidTObject::Obsolete(const char* method, const char* asOfVers, const char* removedFromVers) const
voidTObject::operator delete(void* ptr)
voidTObject::operator delete(void* ptr, void* vp)
voidTObject::operator delete[](void* ptr)
voidTObject::operator delete[](void* ptr, void* vp)
void*TObject::operator new(size_t sz)
void*TObject::operator new(size_t sz, void* vp)
void*TObject::operator new[](size_t sz)
void*TObject::operator new[](size_t sz, void* vp)
TMVA::MethodSVM&operator=(const TMVA::MethodSVM&)
virtual map<TString,Double_t>TMVA::MethodBase::OptimizeTuningParameters(TString fomType = "ROCIntegral", TString fitType = "FitGA")
virtual voidTObject::Paint(Option_t* option = "")
virtual voidTMVA::Configurable::ParseOptions()
virtual voidTObject::Pop()
virtual voidTObject::Print(Option_t* option = "") const
virtual voidTMVA::MethodBase::PrintHelpMessage() const
voidTMVA::Configurable::PrintOptions() const
voidTMVA::MethodBase::ProcessSetup()
virtual Int_tTObject::Read(const char* name)
voidTMVA::Configurable::ReadOptionsFromStream(istream& istr)
voidTMVA::Configurable::ReadOptionsFromXML(void* node)
voidTMVA::MethodBase::ReadStateFromFile()
voidTMVA::MethodBase::ReadStateFromStream(istream& tf)
voidTMVA::MethodBase::ReadStateFromStream(TFile& rf)
voidTMVA::MethodBase::ReadStateFromXMLString(const char* xmlstr)
virtual voidReadWeightsFromStream(istream& istr)
virtual voidReadWeightsFromStream(TFile& fFin)
virtual voidReadWeightsFromXML(void* wghtnode)
virtual voidTObject::RecursiveRemove(TObject* obj)
voidTMVA::MethodBase::RerouteTransformationHandler(TMVA::TransformationHandler* fTargetTransformation)
virtual voidTMVA::MethodBase::Reset()
voidTObject::ResetBit(UInt_t f)
virtual voidTObject::SaveAs(const char* filename = "", Option_t* option = "") constMENU
virtual voidTObject::SavePrimitive(ostream& out, Option_t* option = "")
virtual voidTMVA::MethodBase::SetAnalysisType(TMVA::Types::EAnalysisType type)
voidTMVA::MethodBase::SetBaseDir(TDirectory* methodDir)
voidTObject::SetBit(UInt_t f)
voidTObject::SetBit(UInt_t f, Bool_t set)
voidTMVA::Configurable::SetConfigDescription(const char* d)
voidTMVA::Configurable::SetConfigName(const char* n)
virtual voidTObject::SetDrawOption(Option_t* option = "")MENU
static voidTObject::SetDtorOnly(void* obj)
voidTMVA::MethodBase::SetMethodBaseDir(TDirectory* methodDir)
voidTMVA::MethodBase::SetMethodDir(TDirectory* methodDir)
voidTMVA::Configurable::SetMsgType(TMVA::EMsgType t)
static voidTObject::SetObjectStat(Bool_t stat)
voidTMVA::Configurable::SetOptions(const TString& s)
voidTMVA::MethodBase::SetSignalReferenceCut(Double_t cut)
voidTMVA::MethodBase::SetSignalReferenceCutOrientation(Double_t cutOrientation)
voidTMVA::MethodBase::SetTestTime(Double_t testTime)
voidTMVA::MethodBase::SetTestvarName(const TString& v = "")
voidTMVA::MethodBase::SetTrainTime(Double_t trainTime)
virtual voidTMVA::MethodBase::SetTuneParameters(map<TString,Double_t> tuneParameters)
virtual voidTObject::SetUniqueID(UInt_t uid)
voidTMVA::MethodBase::SetupMethod()
virtual voidShowMembers(TMemberInspector& insp) const
virtual voidStreamer(TBuffer&)
voidStreamerNVirtual(TBuffer& ClassDef_StreamerNVirtual_b)
virtual voidTObject::SysError(const char* method, const char* msgfmt) const
Bool_tTObject::TestBit(UInt_t f) const
Int_tTObject::TestBits(UInt_t f) const
virtual voidTMVA::MethodBase::TestClassification()
virtual voidTMVA::MethodBase::TestMulticlass()
virtual voidTMVA::MethodBase::TestRegression(Double_t& bias, Double_t& biasT, Double_t& dev, Double_t& devT, Double_t& rms, Double_t& rmsT, Double_t& mInf, Double_t& mInfT, Double_t& corr, TMVA::Types::ETreeType type)
virtual voidTrain()
voidTMVA::MethodBase::TrainMethod()
virtual voidTObject::UseCurrentStyle()
virtual voidTObject::Warning(const char* method, const char* msgfmt) const
virtual Int_tTObject::Write(const char* name = 0, Int_t option = 0, Int_t bufsize = 0)
virtual Int_tTObject::Write(const char* name = 0, Int_t option = 0, Int_t bufsize = 0) const
virtual voidTMVA::MethodBase::WriteEvaluationHistosToFile(TMVA::Types::ETreeType treetype)
virtual voidTMVA::MethodBase::WriteMonitoringHistosToFile() const
voidTMVA::Configurable::WriteOptionsToStream(ostream& o, const TString& prefix) const
voidTMVA::MethodBase::WriteStateToFile() const
voidWriteWeightsToStream(TFile& fout) const
protected:
virtual voidTObject::DoError(int level, const char* location, const char* fmt, va_list va) const
voidTMVA::Configurable::EnableLooseOptions(Bool_t b = kTRUE)
virtual voidGetHelpMessage() const
const TString&TMVA::MethodBase::GetInternalVarName(Int_t ivar) const
const TString&TMVA::MethodBase::GetOriginalVarName(Int_t ivar) const
const TString&TMVA::Configurable::GetReferenceFile() const
static TMVA::MethodBase*TMVA::MethodBase::GetThisBase()
const TString&TMVA::MethodBase::GetWeightFileDir() const
Bool_tTMVA::MethodBase::HasTrainingTree() const
Bool_tTMVA::MethodBase::Help() const
Bool_tTMVA::MethodBase::IgnoreEventsWithNegWeightsInTraining() const
Bool_tTMVA::MethodBase::IsConstructedFromWeightFile() const
Bool_tTMVA::MethodBase::IsNormalised() const
TMVA::MsgLogger&TMVA::Configurable::Log() const
Bool_tTMVA::Configurable::LooseOptionCheckingEnabled() const
virtual voidMakeClassSpecific(ostream&, const TString&) const
virtual voidTMVA::MethodBase::MakeClassSpecificHeader(ostream&, const TString& = "") const
voidTObject::MakeZombie()
voidTMVA::MethodBase::NoErrorCalc(Double_t*const err, Double_t*const errUpper)
voidTMVA::Configurable::ResetSetFlag()
voidTMVA::MethodBase::SetNormalised(Bool_t norm)
voidTMVA::MethodBase::SetWeightFileDir(TString fileDir)
voidTMVA::MethodBase::SetWeightFileName(TString)
voidTMVA::MethodBase::Statistics(TMVA::Types::ETreeType treeType, const TString& theVarName, Double_t&, Double_t&, Double_t&, Double_t&, Double_t&, Double_t&)
Bool_tTMVA::MethodBase::TxtWeightsOnly() const
Bool_tTMVA::MethodBase::Verbose() const
voidTMVA::Configurable::WriteOptionsReferenceToFile()
private:
virtual voidDeclareCompatibilityOptions()
virtual voidDeclareOptions()
virtual voidProcessOptions()

Data Members

public:
Bool_tTMVA::MethodBase::fSetupCompletedis method setup
const TMVA::Event*TMVA::MethodBase::fTmpEvent! temporary event when testing on a different DataSet than the own one
static TObject::(anonymous)TObject::kBitMask
static TObject::EStatusBitsTObject::kCanDelete
static TObject::EStatusBitsTObject::kCannotPick
static TObject::EStatusBitsTObject::kHasUUID
static TObject::EStatusBitsTObject::kInvalidObject
static TObject::(anonymous)TObject::kIsOnHeap
static TObject::EStatusBitsTObject::kIsReferenced
static TObject::EStatusBitsTObject::kMustCleanup
static TObject::EStatusBitsTObject::kNoContextMenu
static TObject::(anonymous)TObject::kNotDeleted
static TObject::EStatusBitsTObject::kObjInCanvas
static TObject::(anonymous)TObject::kOverwrite
static TMVA::MethodBase::EWeightFileTypeTMVA::MethodBase::kROOT
static TObject::(anonymous)TObject::kSingleKey
static TMVA::MethodBase::EWeightFileTypeTMVA::MethodBase::kTEXT
static TObject::(anonymous)TObject::kWriteDelete
static TObject::(anonymous)TObject::kZombie
protected:
TMVA::Types::EAnalysisTypeTMVA::MethodBase::fAnalysisTypemethod-mode : true --> regression, false --> classification
UInt_tTMVA::MethodBase::fBackgroundClassindex of the Background-class
vector<TString>*TMVA::MethodBase::fInputVarsvector of input variables used in MVA
vector<Float_t>*TMVA::MethodBase::fMulticlassReturnValholds the return-values for the multiclass classification
Int_tTMVA::MethodBase::fNbinsnumber of bins in input variable histograms
Int_tTMVA::MethodBase::fNbinsHnumber of bins in evaluation histograms
Int_tTMVA::MethodBase::fNbinsMVAoutputnumber of bins in MVA output histograms
TMVA::Ranking*TMVA::MethodBase::fRankingpointer to ranking object (created by derived classifiers)
vector<Float_t>*TMVA::MethodBase::fRegressionReturnValholds the return-values for the regression
UInt_tTMVA::MethodBase::fSignalClassindex of the Signal-class
private:
Float_tfBparmfree plane coefficient
Float_tfCostcost value
Float_tfDoubleSigmaSquaredfor RBF Kernel
Float_tfGammaRBF Kernel parameter
vector<TMVA::SVEvent*>*fInputDatavector of training data in SVM format
Float_tfKappafor Sigmoidal Kernel
UInt_tfMaxItermax number of iteration
TVectorD*fMaxVarsfor normalization //is it still needed??
TVectorD*fMinVarsfor normalization //is it still needed??
UShort_tfNSubSetsnr of subsets, default 1
Int_tfOrderfor Polynomial Kernel ( polynomial order )
TMVA::SVKernelFunction*fSVKernelFunctionkernel function
vector<TMVA::SVEvent*>*fSupportVectorscontains support vectors
TStringfTheKernelkernel name
Float_tfThetafor Sigmoidal Kernel
Float_tfTolerancetolerance parameter
TMVA::SVWorkingSet*fWgSetsvm working set

Class Charts

Inheritance Inherited Members Includes Libraries
Class Charts

Function documentation

MethodSVM(const TString& jobName, const TString& methodTitle, TMVA::DataSetInfo& theData, const TString& theOption = "", TDirectory* theTargetDir = 0)
 standard constructor
MethodSVM(TMVA::DataSetInfo& theData, const TString& theWeightFile, TDirectory* theTargetDir = __null)
 constructor from weight file
~MethodSVM()
 destructor
Bool_t HasAnalysisType(TMVA::Types::EAnalysisType type, UInt_t numberClasses, UInt_t numberTargets)
 SVM can handle classification with 2 classes and regression with one regression-target
void Init()
 default initialisation
void DeclareOptions()
 declare options available for this method
void DeclareCompatibilityOptions()
 options that are used ONLY for the READER to ensure backward compatibility
void ProcessOptions()
 option post processing (if necessary)
void Train()
 Train SVM
void AddWeightsXMLTo(void* parent) const
 write configuration to xml file
void ReadWeightsFromXML(void* wghtnode)
void WriteWeightsToStream(TFile& fout) const
TODO write IT
 write training sample (TTree) to file
void ReadWeightsFromStream(istream& istr)
void ReadWeightsFromStream(TFile& fFin)
 TODO write IT
Double_t GetMvaValue(Double_t* err = 0, Double_t* errUpper = 0)
 returns MVA value for given event
const std::vector<Float_t>& GetRegressionValues()
void MakeClassSpecific(ostream& , const TString& ) const
 write specific classifier response
void GetHelpMessage() const
 get help message text

 typical length of text line:
         "|--------------------------------------------------------------|"
MethodSVM(const TString& jobName, const TString& methodTitle, TMVA::DataSetInfo& theData, const TString& theOption = "", TDirectory* theTargetDir = 0)
const Ranking* CreateRanking()
 ranking of input variables
{ return 0; }