DenoisePropagation.cxx

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// @(#)root/tmva/tmva/dnn:$Id$
// Author: Akshay Vashistha(ajatgd)

/*************************************************************************
 * Copyright (C) 2017 ajatgd                                             *
 * All rights reserved.                                                  *
 *                                                                       *
 * For the licensing terms see $ROOTSYS/LICENSE.                         *
 * For the list of contributors see $ROOTSYS/README/CREDITS.             *
 *************************************************************************/

//////////////////////////////////////////////////////////////////
// Implementation of the Denoise Autoencoder functions for the  //
// reference implementation.                                    //
//////////////////////////////////////////////////////////////////

#include "TMVA/DNN/Architectures/Reference.h"

#include <cmath>
#include <cstdlib>
#include <iostream>
namespace TMVA
{
namespace DNN
{

//______________________________________________________________________________

template<typename Real_t>
void TReference<Real_t>::AddBiases(TMatrixT<Real_t> &A,
                                   const TMatrixT<Real_t> &biases)
{
   size_t m,n;
   m = A.GetNrows();
   n= A.GetNcols();
   for(size_t i = 0; i<m; i++)
   {
      for(size_t j=0; j<n; j++)
      {
         A(i, j) += biases(i, 0);
      }
   }
}

//______________________________________________________________________________

template <typename Real_t>
void TReference<Real_t>::UpdateParams(
   TMatrixT<Real_t> &x, TMatrixT<Real_t> &tildeX, TMatrixT<Real_t> &y,
   TMatrixT<Real_t> &z, TMatrixT<Real_t> &fVBiases, TMatrixT<Real_t> &fHBiases,
   TMatrixT<Real_t> &fWeights, TMatrixT<Real_t> &VBiasError,
   TMatrixT<Real_t> &HBiasError, Real_t learningRate, size_t fBatchSize) {

   //updating fVBiases
   for (size_t i = 0; i < (size_t)fVBiases.GetNrows(); i++)
   {
      for (size_t j = 0; j < (size_t)fVBiases.GetNcols(); j++) {
         VBiasError(i, j) = x(i, j) - z(i, j);
         fVBiases(i, j) += learningRate * VBiasError(i, j) / fBatchSize;
      }
   }

  //updating fHBiases
   for (Int_t i = 0; i < fHBiases.GetNrows(); i++) {
      HBiasError(i,0) = 0;
      for (Int_t j = 0; j < fVBiases.GetNrows(); j++) {
         HBiasError(i, 0) += fWeights(i, j) * VBiasError(j, 0);
      }
      HBiasError(i, 0) *= y(i, 0) * (1 - y(i, 0));
      fHBiases(i, 0) += learningRate * HBiasError(i, 0) / fBatchSize;
   }

   //updating weights
   for (Int_t i = 0; i < fHBiases.GetNrows(); i++) {
      for (Int_t j = 0; j < fVBiases.GetNrows(); j++) {
         fWeights(i, j) += learningRate * (HBiasError(i, 0) * tildeX(j, 0) +
                                          VBiasError(j, 0) * y(i, 0)) / fBatchSize;
      }
   }
}

//______________________________________________________________________________

template<typename Real_t>
void TReference<Real_t>::SoftmaxAE(TMatrixT<Real_t> & A)
{
   size_t m,n;
   m = A.GetNrows();
   n = A.GetNcols();

   Real_t sum = 0.0;
   for (size_t i = 0; i < m; i++) {
      for (size_t j = 0; j < n; j++) {
         sum += exp(A(i, j));
      }
   }

   for (size_t i = 0; i < m; i++) {
      for (size_t j = 0; j < n; j++) {
         A(i, j) = exp(A(i, j)) / sum;
      }
   }
}

//______________________________________________________________________________

template <typename Real_t>
void TReference<Real_t>::CorruptInput(TMatrixT<Real_t> &input,
                                      TMatrixT<Real_t> &corruptedInput,
                                      Real_t corruptionLevel) {
   for(size_t i=0; i< (size_t)input.GetNrows(); i++)
   {
      for(size_t j=0; j<(size_t)input.GetNcols(); j++ )
      {

         if ((size_t)((rand() / (RAND_MAX + 1.0)) * 100) %
              ((size_t)(corruptionLevel * 10)) ==
          0)
         {
            corruptedInput(i, j) = 0;
         }
         else
         {
            corruptedInput(i, j) = input(i, j);
         }
      }
   }
}


//______________________________________________________________________________

template <typename Real_t>
void TReference<Real_t>::EncodeInput(TMatrixT<Real_t> &input,
                                     TMatrixT<Real_t> &compressedInput,
                                     TMatrixT<Real_t> &Weights) {

   size_t m, a;
   m = compressedInput.GetNrows();
   a = input.GetNrows();

   for (size_t i = 0; i < m; i++) {
      compressedInput(i, 0) = 0;
      for (size_t j = 0; j < a; j++) {
         compressedInput(i, 0) =
          compressedInput(i, 0) + (Weights(i, j) * input(j, 0));
      }
   }
}
//______________________________________________________________________________
template <typename Real_t>
void TReference<Real_t>::ReconstructInput(TMatrixT<Real_t> &compressedInput,
                                          TMatrixT<Real_t> &reconstructedInput,
                                          TMatrixT<Real_t> &fWeights) {
  for (size_t i=0; i<(size_t)reconstructedInput.GetNrows(); i++)
  {
      reconstructedInput(i, 0) = 0;
      for(size_t j=0; j<(size_t)compressedInput.GetNrows();j++)
      {
         reconstructedInput(i, 0) += fWeights(j, i) * compressedInput(j, 0);
      }
   }
}

//______________________________________________________________________________
// Logistic Regression Layer Methods
//
//______________________________________________________________________________

template<typename Real_t>
void TReference<Real_t>::ForwardLogReg(TMatrixT<Real_t> &input,
                                       TMatrixT<Real_t> &p,
                                       TMatrixT<Real_t> &fWeights)
{
   size_t m,n;
   m = p.GetNrows();
   n = input.GetNrows();
   for(size_t i= 0; i < m; i++)
   {
      p(i, 0) = 0;
      for(size_t j=0; j < n; j++)
      {
         p(i, 0) += fWeights(i, j) * input(j, 0);
      }
   }
}

//______________________________________________________________________________

template<typename Real_t>
void TReference<Real_t>::UpdateParamsLogReg(TMatrixT<Real_t> &input,
                                            TMatrixT<Real_t> &output,
                                            TMatrixT<Real_t> &difference,
                                            TMatrixT<Real_t> &p,
                                            TMatrixT<Real_t> &fWeights,
                                            TMatrixT<Real_t> &fBiases,
                                            Real_t learningRate,
                                            size_t fBatchSize)
{
   size_t m,n;
   m = p.GetNrows();
   n = input.GetNrows();

   for(size_t i= 0; i<m; i++)
   {
      difference(i, 0) = output(i, 0) - p(i, 0);
      for(size_t j=0; j<n; j++)
      {
         fWeights(i, j) +=
          learningRate * difference(i, 0) * input(j, 0) / fBatchSize;
      }

      fBiases(i, 0) += learningRate * difference(i, 0) / fBatchSize;
   }
}
//______________________________________________________________________________

}
}