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Reference Guide
RooStats::AsymptoticCalculator Class Reference

Hypothesis Test Calculator based on the asymptotic formulae for the profile likelihood ratio.

It performs hypothesis tests using the asymptotic formula for the profile likelihood, and uses the Asimov data set to compute expected significances or limits.

See G. Cowan, K. Cranmer, E. Gross and O. Vitells: Asymptotic formulae for likelihood- based tests of new physics. Eur. Phys. J., C71:1–19, 2011. It provides methods to perform hypothesis tests using the likelihood function, and computes the \(p\)-values for the null and the alternate hypothesis using the asymptotic formulae for the profile likelihood ratio described in the given paper.

The calculator provides methods to produce the Asimov dataset, i.e. a dataset generated where the observed values are equal to the expected ones. The Asimov data set is then used to compute the observed asymptotic \(p\)-value for the alternate hypothesis and the asymptotic expected \(p\)-values.

The asymptotic formulae are valid only for one POI (parameter of interest). So the calculator works only for one-dimensional (one POI) models. If more than one POI exists, only the first one is used.

The calculator can generate Asimov datasets from two kinds of PDFs:

  • "Counting" distributions: RooPoisson, RooGaussian, or products of RooPoissons.
  • Extended, i.e. number of events can be read off from extended likelihood term.

Definition at line 27 of file AsymptoticCalculator.h.

Public Member Functions

 AsymptoticCalculator (RooAbsData &data, const ModelConfig &altModel, const ModelConfig &nullModel, bool nominalAsimov=false)
 constructor for asymptotic calculator from Data set and ModelConfig More...
 
 ~AsymptoticCalculator ()
 
const RooArgSetGetBestFitParams () const
 return best fit value for all parameters More...
 
const RooArgSetGetBestFitPoi () const
 return snapshot of the best fit parameter More...
 
virtual HypoTestResultGetHypoTest () const
 re-implement HypoTest computation using the asymptotic More...
 
const RooRealVarGetMuHat () const
 return best fit parameter (firs of poi) More...
 
bool Initialize () const
 initialize the calculator by performing a global fit and make the Asimov data set More...
 
bool IsOneSidedDiscovery () const
 
bool IsTwoSided () const
 
virtual void SetAlternateModel (const ModelConfig &altModel)
 Set the model for the alternate hypothesis (S+B) More...
 
virtual void SetData (RooAbsData &data)
 Set the DataSet. More...
 
virtual void SetNullModel (const ModelConfig &nullModel)
 re-implementation of setters since they are needed to re-initialize the calculator More...
 
void SetOneSided (bool on)
 set test statistic for one sided (upper limits) More...
 
void SetOneSidedDiscovery (bool on)
 set the test statistics for one-sided discovery More...
 
void SetQTilde (bool on)
 set using of qtilde, by default is controlled if RoORealVar is limited or not More...
 
void SetTwoSided ()
 set the test statistics for two sided (in case of upper limits for discovery does not make really sense) More...
 
- Public Member Functions inherited from RooStats::HypoTestCalculatorGeneric
 HypoTestCalculatorGeneric (const RooAbsData &data, const ModelConfig &altModel, const ModelConfig &nullModel, TestStatSampler *sampler=0)
 Constructor. More...
 
 ~HypoTestCalculatorGeneric ()
 
const ModelConfigGetAlternateModel (void) const
 
const RooAbsDataGetData (void) const
 
virtual const RooArgSetGetFitInfo () const
 
const ModelConfigGetNullModel (void) const
 
TestStatSamplerGetTestStatSampler (void) const
 Returns instance of TestStatSampler. More...
 
void UseSameAltToys ()
 Set this for re-using always the same toys for alternate hypothesis in case of calls at different null parameter points This is useful to get more stable bands when running the HypoTest inversion. More...
 
- Public Member Functions inherited from RooStats::HypoTestCalculator
virtual ~HypoTestCalculator ()
 
virtual void SetCommonModel (const ModelConfig &model)
 

Static Public Member Functions

static RooAbsDataGenerateAsimovData (const RooAbsPdf &pdf, const RooArgSet &observables)
 generate the asimov data for the observables (not the global ones) need to deal with the case of a sim pdf More...
 
static double GetExpectedPValues (double pnull, double palt, double nsigma, bool usecls, bool oneSided=true)
 function given the null and the alt p value - return the expected one given the N - sigma value More...
 
static RooAbsDataMakeAsimovData (const ModelConfig &model, const RooArgSet &allParamValues, RooArgSet &globObs)
 Make a nominal Asimov data set from a model. More...
 
static RooAbsDataMakeAsimovData (RooAbsData &data, const ModelConfig &model, const RooArgSet &poiValues, RooArgSet &globObs, const RooArgSet *genPoiValues=0)
 Make Asimov data. More...
 
static void SetPrintLevel (int level)
 set print level (static function) More...
 

Static Protected Member Functions

static double EvaluateNLL (RooAbsPdf &pdf, RooAbsData &data, const RooArgSet *condObs, const RooArgSet *globObs, const RooArgSet *poiSet=0)
 
static void FillBins (const RooAbsPdf &pdf, const RooArgList &obs, RooAbsData &data, int &index, double &binVolume, int &ibin)
 fill bins by looping recursively on observables More...
 
static RooAbsDataGenerateAsimovDataSinglePdf (const RooAbsPdf &pdf, const RooArgSet &obs, const RooRealVar &weightVar, RooCategory *channelCat=0)
 Compute the asimov data set for an observable of a pdf. More...
 
static RooAbsDataGenerateCountingAsimovData (RooAbsPdf &pdf, const RooArgSet &obs, const RooRealVar &weightVar, RooCategory *channelCat=0)
 Generate counting Asimov data for the case when the pdf cannot be extended. More...
 
static bool SetObsToExpected (RooAbsPdf &pdf, const RooArgSet &obs)
 set observed value to the expected one works for Gaussian, Poisson or LogNormal assumes mean parameter value is the argument not constant and not depending on observables (if more than two arguments are not constant will use first one but print a warning !) need to iterate on the components of the Poisson to get n and nu (nu can be a RooAbsReal) (code from G. More...
 
static bool SetObsToExpected (RooProdPdf &prod, const RooArgSet &obs)
 Inpspect a product pdf to find all the Poisson or Gaussian parts to set the observed values to expected ones. More...
 

Private Attributes

RooAbsDatafAsimovData
 
RooArgSet fAsimovGlobObs
 
RooArgSet fBestFitParams
 
RooArgSet fBestFitPoi
 
bool fIsInitialized
 
double fNLLAsimov
 
double fNLLObs
 
bool fNominalAsimov
 
bool fOneSided
 
bool fOneSidedDiscovery
 
int fUseQTilde
 flag to check if calculator is initialized More...
 

Static Private Attributes

static int fgPrintLevel = 1
 

Additional Inherited Members

- Protected Member Functions inherited from RooStats::HypoTestCalculatorGeneric
virtual int CheckHook (void) const
 
virtual void PostHook () const
 
virtual int PreAltHook (RooArgSet *, double) const
 
virtual void PreHook () const
 
virtual int PreNullHook (RooArgSet *, double) const
 
- Protected Attributes inherited from RooStats::HypoTestCalculatorGeneric
const ModelConfigfAltModel
 
unsigned int fAltToysSeed
 
const RooAbsDatafData
 
TestStatSamplerfDefaultSampler
 
TestStatisticfDefaultTestStat
 
const ModelConfigfNullModel
 
TestStatSamplerfTestStatSampler
 

#include <RooStats/AsymptoticCalculator.h>

Inheritance diagram for RooStats::AsymptoticCalculator:
[legend]

Constructor & Destructor Documentation

◆ AsymptoticCalculator()

AsymptoticCalculator::AsymptoticCalculator ( RooAbsData data,
const ModelConfig altModel,
const ModelConfig nullModel,
bool  nominalAsimov = false 
)

constructor for asymptotic calculator from Data set and ModelConfig

Definition at line 94 of file AsymptoticCalculator.cxx.

◆ ~AsymptoticCalculator()

RooStats::AsymptoticCalculator::~AsymptoticCalculator ( )
inline

Definition at line 40 of file AsymptoticCalculator.h.

Member Function Documentation

◆ EvaluateNLL()

Double_t AsymptoticCalculator::EvaluateNLL ( RooAbsPdf pdf,
RooAbsData data,
const RooArgSet condObs,
const RooArgSet globObs,
const RooArgSet poiSet = 0 
)
staticprotected

Definition at line 291 of file AsymptoticCalculator.cxx.

◆ FillBins()

void AsymptoticCalculator::FillBins ( const RooAbsPdf pdf,
const RooArgList obs,
RooAbsData data,
int index,
double binVolume,
int ibin 
)
staticprotected

fill bins by looping recursively on observables

Definition at line 857 of file AsymptoticCalculator.cxx.

◆ GenerateAsimovData()

RooAbsData * AsymptoticCalculator::GenerateAsimovData ( const RooAbsPdf pdf,
const RooArgSet observables 
)
static

generate the asimov data for the observables (not the global ones) need to deal with the case of a sim pdf

Definition at line 1132 of file AsymptoticCalculator.cxx.

◆ GenerateAsimovDataSinglePdf()

RooAbsData * AsymptoticCalculator::GenerateAsimovDataSinglePdf ( const RooAbsPdf pdf,
const RooArgSet allobs,
const RooRealVar weightVar,
RooCategory channelCat = 0 
)
staticprotected

Compute the asimov data set for an observable of a pdf.

It generates binned data following the binning of the observables.

Definition at line 1054 of file AsymptoticCalculator.cxx.

◆ GenerateCountingAsimovData()

RooAbsData * AsymptoticCalculator::GenerateCountingAsimovData ( RooAbsPdf pdf,
const RooArgSet observables,
const RooRealVar weightVar,
RooCategory channelCat = 0 
)
staticprotected

Generate counting Asimov data for the case when the pdf cannot be extended.

This function assumes that the pdf is a RooPoisson or can be decomposed in a product of RooPoisson, or is a RooGaussian. Otherwise, we cannot know how to make the Asimov data sets.

Definition at line 1016 of file AsymptoticCalculator.cxx.

◆ GetBestFitParams()

const RooArgSet& RooStats::AsymptoticCalculator::GetBestFitParams ( ) const
inline

return best fit value for all parameters

Definition at line 100 of file AsymptoticCalculator.h.

◆ GetBestFitPoi()

const RooArgSet& RooStats::AsymptoticCalculator::GetBestFitPoi ( ) const
inline

return snapshot of the best fit parameter

Definition at line 96 of file AsymptoticCalculator.h.

◆ GetExpectedPValues()

double AsymptoticCalculator::GetExpectedPValues ( double  pnull,
double  palt,
double  nsigma,
bool  usecls,
bool  oneSided = true 
)
static

function given the null and the alt p value - return the expected one given the N - sigma value

Definition at line 808 of file AsymptoticCalculator.cxx.

◆ GetHypoTest()

HypoTestResult * AsymptoticCalculator::GetHypoTest ( ) const
virtual

re-implement HypoTest computation using the asymptotic

It performs an hypothesis tests using the likelihood function and computes the p values for the null and the alternate using the asymptotic formulae for the profile likelihood ratio.

See G. Cowan, K. Cranmer, E. Gross and O. Vitells. Asymptotic formulae for likelihood- based tests of new physics. Eur. Phys. J., C71:1–19, 2011. The formulae are valid only for one POI. If more than one POI exists consider as POI only the first one

Reimplemented from RooStats::HypoTestCalculatorGeneric.

Definition at line 476 of file AsymptoticCalculator.cxx.

◆ GetMuHat()

const RooRealVar* RooStats::AsymptoticCalculator::GetMuHat ( ) const
inline

return best fit parameter (firs of poi)

Definition at line 98 of file AsymptoticCalculator.h.

◆ Initialize()

bool AsymptoticCalculator::Initialize ( ) const

initialize the calculator by performing a global fit and make the Asimov data set

Initialize the calculator The initialization will perform a global fit of the model to the data and build an Asimov data set.

It will then also fit the model to the Asimov data set to find the likelihood value of the Asimov data set nominalAsimov is an option for using Asimov data set obtained using nominal nuisance parameter values By default the nuisance parameters are fitted to the data NOTE: If a fit has been done before, one for speeding up could set all the initial parameters to the fit value and in addition set the null snapshot to the best fit

Definition at line 132 of file AsymptoticCalculator.cxx.

◆ IsOneSidedDiscovery()

bool RooStats::AsymptoticCalculator::IsOneSidedDiscovery ( ) const
inline

Definition at line 89 of file AsymptoticCalculator.h.

◆ IsTwoSided()

bool RooStats::AsymptoticCalculator::IsTwoSided ( ) const
inline

Definition at line 88 of file AsymptoticCalculator.h.

◆ MakeAsimovData() [1/2]

RooAbsData * AsymptoticCalculator::MakeAsimovData ( const ModelConfig model,
const RooArgSet allParamValues,
RooArgSet asimovGlobObs 
)
static

Make a nominal Asimov data set from a model.

Parameters
modelModelConfig that contains the model pdf and the model parameters
allParamValuesThe parameters fo the model will be set to the values given in this set
[out]asimovGlobObsGlobal observables set to values satisfying the constraints
Returns
Asimov data set. The user takes ownership.

The parameter values (including the nuisance parameter) can result from a fit to data or be at the nominal values.

Definition at line 1337 of file AsymptoticCalculator.cxx.

◆ MakeAsimovData() [2/2]

RooAbsData * AsymptoticCalculator::MakeAsimovData ( RooAbsData realData,
const ModelConfig model,
const RooArgSet paramValues,
RooArgSet asimovGlobObs,
const RooArgSet genPoiValues = 0 
)
static

Make Asimov data.

Make the Asimov data from the ModelConfig and list of poi.

Parameters
realDataReal data
modelModel config defining the pdf and the parameters
paramValuesThe snapshot of POI and parameters used for finding the best nuisance parameter values (conditioned at these values)
[out]asimovGlobObsGlobal observables set to values satisfying the constraints
genPoiValuesOptional. A different set of POI values used for generating. By default the same POI are used for generating and for finding the nuisance parameters given an observed data set, a model and a snapshot of the poi.
Returns
The asimov data set. The user takes ownership.

Definition at line 1216 of file AsymptoticCalculator.cxx.

◆ SetAlternateModel()

virtual void RooStats::AsymptoticCalculator::SetAlternateModel ( const ModelConfig altModel)
inlinevirtual

Set the model for the alternate hypothesis (S+B)

Reimplemented from RooStats::HypoTestCalculatorGeneric.

Definition at line 78 of file AsymptoticCalculator.h.

◆ SetData()

virtual void RooStats::AsymptoticCalculator::SetData ( RooAbsData data)
inlinevirtual

Set the DataSet.

Reimplemented from RooStats::HypoTestCalculatorGeneric.

Definition at line 82 of file AsymptoticCalculator.h.

◆ SetNullModel()

virtual void RooStats::AsymptoticCalculator::SetNullModel ( const ModelConfig nullModel)
inlinevirtual

re-implementation of setters since they are needed to re-initialize the calculator

Reimplemented from RooStats::HypoTestCalculatorGeneric.

Definition at line 74 of file AsymptoticCalculator.h.

◆ SetObsToExpected() [1/2]

bool AsymptoticCalculator::SetObsToExpected ( RooAbsPdf pdf,
const RooArgSet obs 
)
staticprotected

set observed value to the expected one works for Gaussian, Poisson or LogNormal assumes mean parameter value is the argument not constant and not depending on observables (if more than two arguments are not constant will use first one but print a warning !) need to iterate on the components of the Poisson to get n and nu (nu can be a RooAbsReal) (code from G.

Petrucciani and extended by L.M.)

Definition at line 962 of file AsymptoticCalculator.cxx.

◆ SetObsToExpected() [2/2]

bool AsymptoticCalculator::SetObsToExpected ( RooProdPdf prod,
const RooArgSet obs 
)
staticprotected

Inpspect a product pdf to find all the Poisson or Gaussian parts to set the observed values to expected ones.

Definition at line 923 of file AsymptoticCalculator.cxx.

◆ SetOneSided()

void RooStats::AsymptoticCalculator::SetOneSided ( bool  on)
inline

set test statistic for one sided (upper limits)

Definition at line 64 of file AsymptoticCalculator.h.

◆ SetOneSidedDiscovery()

void RooStats::AsymptoticCalculator::SetOneSidedDiscovery ( bool  on)
inline

set the test statistics for one-sided discovery

Definition at line 71 of file AsymptoticCalculator.h.

◆ SetPrintLevel()

void AsymptoticCalculator::SetPrintLevel ( int  level)
static

set print level (static function)

  • 0 minimal,
  • 1 normal,
  • 2 debug

Definition at line 87 of file AsymptoticCalculator.cxx.

◆ SetQTilde()

void RooStats::AsymptoticCalculator::SetQTilde ( bool  on)
inline

set using of qtilde, by default is controlled if RoORealVar is limited or not

Definition at line 93 of file AsymptoticCalculator.h.

◆ SetTwoSided()

void RooStats::AsymptoticCalculator::SetTwoSided ( )
inline

set the test statistics for two sided (in case of upper limits for discovery does not make really sense)

Definition at line 68 of file AsymptoticCalculator.h.

Member Data Documentation

◆ fAsimovData

RooAbsData* RooStats::AsymptoticCalculator::fAsimovData
mutableprivate

Definition at line 141 of file AsymptoticCalculator.h.

◆ fAsimovGlobObs

RooArgSet RooStats::AsymptoticCalculator::fAsimovGlobObs
mutableprivate

Definition at line 142 of file AsymptoticCalculator.h.

◆ fBestFitParams

RooArgSet RooStats::AsymptoticCalculator::fBestFitParams
mutableprivate

Definition at line 144 of file AsymptoticCalculator.h.

◆ fBestFitPoi

RooArgSet RooStats::AsymptoticCalculator::fBestFitPoi
mutableprivate

Definition at line 143 of file AsymptoticCalculator.h.

◆ fgPrintLevel

int AsymptoticCalculator::fgPrintLevel = 1
staticprivate

Definition at line 137 of file AsymptoticCalculator.h.

◆ fIsInitialized

bool RooStats::AsymptoticCalculator::fIsInitialized
mutableprivate

Definition at line 135 of file AsymptoticCalculator.h.

◆ fNLLAsimov

double RooStats::AsymptoticCalculator::fNLLAsimov
mutableprivate

Definition at line 139 of file AsymptoticCalculator.h.

◆ fNLLObs

double RooStats::AsymptoticCalculator::fNLLObs
mutableprivate

Definition at line 138 of file AsymptoticCalculator.h.

◆ fNominalAsimov

bool RooStats::AsymptoticCalculator::fNominalAsimov
private

Definition at line 134 of file AsymptoticCalculator.h.

◆ fOneSided

bool RooStats::AsymptoticCalculator::fOneSided
private

Definition at line 132 of file AsymptoticCalculator.h.

◆ fOneSidedDiscovery

bool RooStats::AsymptoticCalculator::fOneSidedDiscovery
mutableprivate

Definition at line 133 of file AsymptoticCalculator.h.

◆ fUseQTilde

int RooStats::AsymptoticCalculator::fUseQTilde
mutableprivate

flag to check if calculator is initialized

Definition at line 136 of file AsymptoticCalculator.h.

Libraries for RooStats::AsymptoticCalculator:
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The documentation for this class was generated from the following files: