rf616_morphing.C File Reference

Detailed Description

Use Morphing in RooFit.

This tutorial shows how to use template morphing inside RooFit. As input we have several Gaussian distributions. The output is one gaussian, with a specific mean value. Since likelihoods are often used within the framework of morphing, we provide a way to estimate the negative log likelihood (nll).

Based on example of Kyle Cranmer https://gist.github.com/cranmer/b67830e46d53d5f7cf2d.

 
#include "RooRealVar.h"
#include "RooRealVar.h"
#include "RooWorkspace.h"
#include "RooGaussian.h"
#include "RooUniform.h"
#include "RooDataSet.h"
#include "RooPlot.h"
#include "RooMomentMorphFuncND.h"
#include "RooAbsPdf.h"
 
using namespace RooFit;
 
// Number of samples to fill the histograms
const int n_samples = 1000;
 
// Kills warning massages
RooMsgService::instance().setGlobalKillBelow(RooFit::WARNING);
 
// Define the morphing routine
RooPlot *perform_morphing(RooWorkspace &ws, RooMomentMorphFuncND::Setting setting, double sigma)
{
   // Get Variables from the workspace
   RooRealVar *x_var = ws.var("x");
   RooRealVar *mu_var = ws.var("mu");
   RooAbsPdf *gauss = ws.pdf("gauss");
 
   // Initialize a plot
   RooPlot *frame1 = x_var->frame();
 
   // Define binning for morphing
   RooMomentMorphFuncND::Grid grid(RooBinning(4, 0.0, 4.0));
 
   // Set binning of histograms, has to be customized for optimal results
   x_var->setBins(50);
 
   std::vector<int> parampoints = {0, 1, 2, 3, 4};
 
   for (auto i : parampoints) {
      // Define the sampled gaussians
      RooRealVar mu_help(Form("mu%d", i), Form("mu%d", i), i);
      // Use * because RooGaussian expects objects no pointers
      RooGaussian help(Form("g%d", i), Form("g%d", i), *x_var, mu_help, sigma);
      ws.import(help, Silence(true));
 
      // Fill the histograms use a unique pointer to prevent memory leaks
      std::unique_ptr<RooDataHist> hist1{
         dynamic_cast<RooDataHist *>(ws.pdf(Form("g%d", i))->generateBinned(*x_var, 100 * n_samples))};
 
      // Add the value 1 to each bin
      for (int i_bin = 0; i_bin < hist1->numEntries(); ++i_bin) {
         const RooArgSet *binContent = hist1->get(i_bin);
         hist1->add(*binContent, 1.0);
      }
 
      // Add the pdf to the workspace, the inOrder of 1 is necessary for calculation of the nll
      // Adjust it to 0 to see binning
      ws.import(RooHistPdf(Form("histpdf%d", i), Form("histpdf%d", i), *x_var, *hist1, 1), Silence(true));
 
      // Plot and add the pdf to the grid
      RooAbsPdf *pdf = ws.pdf(Form("histpdf%d", i));
      pdf->plotOn(frame1);
      grid.addPdf(*pdf, i);
   }
 
   // Create the morphing
   RooMomentMorphFuncND morph_func("morpf_func", "morph_func", RooArgList(*mu_var), RooArgList(*x_var), grid, setting);
 
   // Normalizing the morphed object to be a pdf, set it false to prevent warning messages and gain computational speed
   // up
   morph_func.setPdfMode();
 
   // Creating the morphed pdf
   RooWrapperPdf morph("morph", "morph", morph_func, true);
   ws.import(morph, Silence(true));
   RooAbsPdf *morph_ = ws.pdf("morph");
   morph_->plotOn(frame1, LineColor(kRed));
 
   return frame1;
}
 
// Define the workspace
std::unique_ptr<RooWorkspace> build_ws(double mu_observed, double sigma)
{
   auto ws = std::make_unique<RooWorkspace>();
   ws->factory(Form("Gaussian::gauss(x[-5,15],mu[%f,0,4], %f)", mu_observed, sigma));
   return ws;
}
 
// Do the example
void rf616_morphing()
{
   // Define the 'observed' mu
   double mu_observed = 2.5;
   double sigma = 1.5;
 
   // Import variables from workspace
   std::unique_ptr<RooWorkspace> ws = build_ws(mu_observed, sigma);
 
   RooPlot *frame1 = perform_morphing(*ws, RooMomentMorphFuncND::Linear, sigma);
 
   RooRealVar *x_var = ws->var("x");
   RooRealVar *mu_var = ws->var("mu");
   RooAbsPdf *gauss = ws->pdf("gauss");
   RooDataSet *obs_data = gauss->generate(*x_var, n_samples);
 
   // Create the exact negative log likelihood function for Gaussian model
   RooAbsReal *nll_gauss = gauss->createNLL(*obs_data);
 
   // Create the morphed negative log likelihood function
   // TODO: Fix RooAddPdf::fixCoefNormalization(nset) warnings with new CPU backend
   RooAbsReal *nll_morph = ws->pdf("morph")->createNLL(*obs_data, RooFit::EvalBackend("legacy"));
 
   // Plot the negative logarithmic summed likelihood
   RooPlot *frame2 = mu_var->frame(Title("Negative log Likelihood"));
   nll_gauss->plotOn(frame2, LineColor(kBlue), ShiftToZero(), Name("gauss"));
   nll_morph->plotOn(frame2, LineColor(kRed), ShiftToZero(), Name("morph"));
 
   TCanvas *c = new TCanvas("rf616_morphing", "rf616_morphing", 800, 400);
   c->Divide(2);
   c->cd(1);
   gPad->SetLeftMargin(0.15);
   frame1->GetYaxis()->SetTitleOffset(1.4);
   frame1->Draw();
   c->cd(2);
   gPad->SetLeftMargin(0.15);
   frame2->GetYaxis()->SetTitleOffset(1.8);
   frame2->Draw();
 
   // Compute the minimum of the nll via minuit
   std::vector<RooAbsReal *> nlls = {nll_gauss, nll_morph};
   for (auto nll : nlls) {
      RooMinimizer minimizer(*nll);
      minimizer.setPrintLevel(-1);
      minimizer.minimize("Minuit2");
      RooFitResult *result = minimizer.save();
      result->Print();
   }
}

 
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf0_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf1_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf2_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf3_Int[x] is already in this set
[#0] ERROR:InputArguments -- RooArgSet::checkForDup: ERROR argument with name histpdf4_Int[x] is already in this set
 
  RooFitResult: minimized FCN value: 1805.81, estimated distance to minimum: 1.13014e-08
                covariance matrix quality: Full, accurate covariance matrix
                Status : MINIMIZE=0 
 
    Floating Parameter    FinalValue +/-  Error   
  --------------------  --------------------------
                    mu    2.4940e+00 +/-  4.74e-02
 
 
  RooFitResult: minimized FCN value: 1806.33, estimated distance to minimum: 1.41682e-05
                covariance matrix quality: Full, accurate covariance matrix
                Status : MINIMIZE=0 
 
    Floating Parameter    FinalValue +/-  Error   
  --------------------  --------------------------
                    mu    2.4899e+00 +/-  4.59e-02
 

Date

August 2024

Author

Robin Syring

Definition in file rf616_morphing.C.