Helper class to facilitate Monte Carlo studies such as 'goodness-of-fit' studies, that involve fitting a PDF to multiple toy Monte Carlo sets.
These may be generated from either same PDF or from a different PDF with similar parameters.
Given a fit and a generator PDF (they might be identical), RooMCStudy can produce toyMC samples and/or fit these. It accumulates the post-fit parameters of each iteration in a dataset. These can be retrieved using fitParams() or fitParDataSet(). This dataset additionally contains the variables
Additional plotting routines simplify the task of plotting the distribution of the minimized likelihood, the fitted parameter values, fitted error and pull distribution.
RooMCStudy provides the option to insert add-in modules that modify the generate-and-fit cycle and allow to perform extra steps in the cycle. Output of these modules can be stored alongside the fit results in the aggregate results dataset. These study modules should derive from the class RooAbsMCStudyModule.
Check the RooFit tutorials
Some member functions of RooMCStudy that take a RooCmdArg as argument also support keyword arguments. So far, this applies to constructor RooMCStudy(), RooMCStudy::plotParamOn, RooMCStudy::plotParam, RooMCStudy::plotNLL, RooMCStudy::plotError and RooMCStudy::plotPull. For example, the following code is equivalent in PyROOT:
Definition at line 32 of file RooMCStudy.h.
Public Member Functions | |
RooMCStudy (const RooAbsPdf &model, const RooArgSet &observables, const RooCmdArg &arg1={}, const RooCmdArg &arg2={}, const RooCmdArg &arg3={}, const RooCmdArg &arg4={}, const RooCmdArg &arg5={}, const RooCmdArg &arg6={}, const RooCmdArg &arg7={}, const RooCmdArg &arg8={}) | |
Construct Monte Carlo Study Manager. | |
~RooMCStudy () override | |
bool | addFitResult (const RooFitResult &fr) |
Utility function to add fit result from external fit to this RooMCStudy and process its results through the standard RooMCStudy statistics gathering tools. | |
void | addModule (RooAbsMCStudyModule &module) |
Insert given RooMCStudy add-on module to the processing chain of this MCStudy object. | |
bool | fit (Int_t nSamples, const char *asciiFilePat) |
Fit 'nSamples' datasets, which are read from ASCII files. | |
bool | fit (Int_t nSamples, TList &dataSetList) |
Fit 'nSamples' datasets, as supplied in 'dataSetList'. | |
const RooArgSet * | fitParams (Int_t sampleNum) const |
Return an argset with the fit parameters for the given sample number. | |
const RooDataSet & | fitParDataSet () |
Return a RooDataSet containing the post-fit parameters of each toy cycle. | |
const RooFitResult * | fitResult (Int_t sampleNum) const |
Return the RooFitResult of the fit with the given run number. | |
RooAbsData * | genData (Int_t sampleNum) const |
Return the given generated dataset. | |
bool | generate (Int_t nSamples, Int_t nEvtPerSample=0, bool keepGenData=false, const char *asciiFilePat=nullptr) |
Generate 'nSamples' samples of 'nEvtPerSample' events. | |
bool | generateAndFit (Int_t nSamples, Int_t nEvtPerSample=0, bool keepGenData=false, const char *asciiFilePat=nullptr) |
Generate and fit 'nSamples' samples of 'nEvtPerSample' events. | |
const RooDataSet * | genParDataSet () const |
Return dataset with generator parameters for each toy. | |
TClass * | IsA () const override |
RooPlot * | plotError (const RooRealVar ¶m, const RooCmdArg &arg1={}, const RooCmdArg &arg2={}, const RooCmdArg &arg3={}, const RooCmdArg &arg4={}, const RooCmdArg &arg5={}, const RooCmdArg &arg6={}, const RooCmdArg &arg7={}, const RooCmdArg &arg8={}) |
Plot the distribution of the fit errors for the specified parameter on a newly created frame. | |
RooPlot * | plotError (const RooRealVar ¶m, double lo, double hi, Int_t nbins=100) |
Create a RooPlot of the distribution of the fitted errors of the given parameter. | |
RooPlot * | plotNLL (const RooCmdArg &arg1={}, const RooCmdArg &arg2={}, const RooCmdArg &arg3={}, const RooCmdArg &arg4={}, const RooCmdArg &arg5={}, const RooCmdArg &arg6={}, const RooCmdArg &arg7={}, const RooCmdArg &arg8={}) |
Plot the distribution of the -log(L) values on a newly created frame. | |
RooPlot * | plotNLL (double lo, double hi, Int_t nBins=100) |
Create a RooPlot of the -log(L) distribution in the range lo-hi with 'nBins' bins. | |
RooPlot * | plotParam (const char *paramName, const RooCmdArg &arg1={}, const RooCmdArg &arg2={}, const RooCmdArg &arg3={}, const RooCmdArg &arg4={}, const RooCmdArg &arg5={}, const RooCmdArg &arg6={}, const RooCmdArg &arg7={}, const RooCmdArg &arg8={}) |
Plot the distribution of the fitted value of the given parameter on a newly created frame. | |
RooPlot * | plotParam (const RooRealVar ¶m, const RooCmdArg &arg1={}, const RooCmdArg &arg2={}, const RooCmdArg &arg3={}, const RooCmdArg &arg4={}, const RooCmdArg &arg5={}, const RooCmdArg &arg6={}, const RooCmdArg &arg7={}, const RooCmdArg &arg8={}) |
Plot the distribution of the fitted value of the given parameter on a newly created frame. | |
RooPlot * | plotParamOn (RooPlot *frame, const RooCmdArg &arg1={}, const RooCmdArg &arg2={}, const RooCmdArg &arg3={}, const RooCmdArg &arg4={}, const RooCmdArg &arg5={}, const RooCmdArg &arg6={}, const RooCmdArg &arg7={}, const RooCmdArg &arg8={}) |
Plot the distribution of fitted values of a parameter. | |
RooPlot * | plotPull (const RooRealVar ¶m, const RooCmdArg &arg1, const RooCmdArg &arg2={}, const RooCmdArg &arg3={}, const RooCmdArg &arg4={}, const RooCmdArg &arg5={}, const RooCmdArg &arg6={}, const RooCmdArg &arg7={}, const RooCmdArg &arg8={}) |
Plot the distribution of pull values for the specified parameter on a newly created frame. | |
RooPlot * | plotPull (const RooRealVar ¶m, double lo=-3.0, double hi=3.0, Int_t nbins=25, bool fitGauss=false) |
Create a RooPlot of the pull distribution for the given parameter. | |
void | Streamer (TBuffer &) override |
Stream an object of class TObject. | |
void | StreamerNVirtual (TBuffer &ClassDef_StreamerNVirtual_b) |
Public Member Functions inherited from TNamed | |
TNamed () | |
TNamed (const char *name, const char *title) | |
TNamed (const TNamed &named) | |
TNamed copy ctor. | |
TNamed (const TString &name, const TString &title) | |
virtual | ~TNamed () |
TNamed destructor. | |
void | Clear (Option_t *option="") override |
Set name and title to empty strings (""). | |
TObject * | Clone (const char *newname="") const override |
Make a clone of an object using the Streamer facility. | |
Int_t | Compare (const TObject *obj) const override |
Compare two TNamed objects. | |
void | Copy (TObject &named) const override |
Copy this to obj. | |
virtual void | FillBuffer (char *&buffer) |
Encode TNamed into output buffer. | |
const char * | GetName () const override |
Returns name of object. | |
const char * | GetTitle () const override |
Returns title of object. | |
ULong_t | Hash () const override |
Return hash value for this object. | |
TClass * | IsA () const override |
Bool_t | IsSortable () const override |
void | ls (Option_t *option="") const override |
List TNamed name and title. | |
TNamed & | operator= (const TNamed &rhs) |
TNamed assignment operator. | |
void | Print (Option_t *option="") const override |
Print TNamed name and title. | |
virtual void | SetName (const char *name) |
Set the name of the TNamed. | |
virtual void | SetNameTitle (const char *name, const char *title) |
Set all the TNamed parameters (name and title). | |
virtual void | SetTitle (const char *title="") |
Set the title of the TNamed. | |
virtual Int_t | Sizeof () const |
Return size of the TNamed part of the TObject. | |
void | Streamer (TBuffer &) override |
Stream an object of class TObject. | |
void | StreamerNVirtual (TBuffer &ClassDef_StreamerNVirtual_b) |
Public Member Functions inherited from TObject | |
TObject () | |
TObject constructor. | |
TObject (const TObject &object) | |
TObject copy ctor. | |
virtual | ~TObject () |
TObject destructor. | |
void | AbstractMethod (const char *method) const |
Use this method to implement an "abstract" method that you don't want to leave purely abstract. | |
virtual void | AppendPad (Option_t *option="") |
Append graphics object to current pad. | |
virtual void | Browse (TBrowser *b) |
Browse object. May be overridden for another default action. | |
ULong_t | CheckedHash () |
Check and record whether this class has a consistent Hash/RecursiveRemove setup (*) and then return the regular Hash value for this object. | |
virtual const char * | ClassName () const |
Returns name of class to which the object belongs. | |
virtual void | Delete (Option_t *option="") |
Delete this object. | |
virtual Int_t | DistancetoPrimitive (Int_t px, Int_t py) |
Computes distance from point (px,py) to the object. | |
virtual void | Draw (Option_t *option="") |
Default Draw method for all objects. | |
virtual void | DrawClass () const |
Draw class inheritance tree of the class to which this object belongs. | |
virtual TObject * | DrawClone (Option_t *option="") const |
Draw a clone of this object in the current selected pad with: gROOT->SetSelectedPad(c1) . | |
virtual void | Dump () const |
Dump contents of object on stdout. | |
virtual void | Error (const char *method, const char *msgfmt,...) const |
Issue error message. | |
virtual void | Execute (const char *method, const char *params, Int_t *error=nullptr) |
Execute method on this object with the given parameter string, e.g. | |
virtual void | Execute (TMethod *method, TObjArray *params, Int_t *error=nullptr) |
Execute method on this object with parameters stored in the TObjArray. | |
virtual void | ExecuteEvent (Int_t event, Int_t px, Int_t py) |
Execute action corresponding to an event at (px,py). | |
virtual void | Fatal (const char *method, const char *msgfmt,...) const |
Issue fatal error message. | |
virtual TObject * | FindObject (const char *name) const |
Must be redefined in derived classes. | |
virtual TObject * | FindObject (const TObject *obj) const |
Must be redefined in derived classes. | |
virtual Option_t * | GetDrawOption () const |
Get option used by the graphics system to draw this object. | |
virtual const char * | GetIconName () const |
Returns mime type name of object. | |
virtual char * | GetObjectInfo (Int_t px, Int_t py) const |
Returns string containing info about the object at position (px,py). | |
virtual Option_t * | GetOption () const |
virtual UInt_t | GetUniqueID () const |
Return the unique object id. | |
virtual Bool_t | HandleTimer (TTimer *timer) |
Execute action in response of a timer timing out. | |
Bool_t | HasInconsistentHash () const |
Return true is the type of this object is known to have an inconsistent setup for Hash and RecursiveRemove (i.e. | |
virtual void | Info (const char *method, const char *msgfmt,...) const |
Issue info message. | |
virtual Bool_t | InheritsFrom (const char *classname) const |
Returns kTRUE if object inherits from class "classname". | |
virtual Bool_t | InheritsFrom (const TClass *cl) const |
Returns kTRUE if object inherits from TClass cl. | |
virtual void | Inspect () const |
Dump contents of this object in a graphics canvas. | |
void | InvertBit (UInt_t f) |
Bool_t | IsDestructed () const |
IsDestructed. | |
virtual Bool_t | IsEqual (const TObject *obj) const |
Default equal comparison (objects are equal if they have the same address in memory). | |
virtual Bool_t | IsFolder () const |
Returns kTRUE in case object contains browsable objects (like containers or lists of other objects). | |
R__ALWAYS_INLINE Bool_t | IsOnHeap () const |
R__ALWAYS_INLINE Bool_t | IsZombie () const |
void | MayNotUse (const char *method) const |
Use this method to signal that a method (defined in a base class) may not be called in a derived class (in principle against good design since a child class should not provide less functionality than its parent, however, sometimes it is necessary). | |
virtual Bool_t | Notify () |
This method must be overridden to handle object notification (the base implementation is no-op). | |
void | Obsolete (const char *method, const char *asOfVers, const char *removedFromVers) const |
Use this method to declare a method obsolete. | |
void | operator delete (void *ptr) |
Operator delete. | |
void | operator delete (void *ptr, void *vp) |
Only called by placement new when throwing an exception. | |
void | operator delete[] (void *ptr) |
Operator delete []. | |
void | operator delete[] (void *ptr, void *vp) |
Only called by placement new[] when throwing an exception. | |
void * | operator new (size_t sz) |
void * | operator new (size_t sz, void *vp) |
void * | operator new[] (size_t sz) |
void * | operator new[] (size_t sz, void *vp) |
TObject & | operator= (const TObject &rhs) |
TObject assignment operator. | |
virtual void | Paint (Option_t *option="") |
This method must be overridden if a class wants to paint itself. | |
virtual void | Pop () |
Pop on object drawn in a pad to the top of the display list. | |
virtual Int_t | Read (const char *name) |
Read contents of object with specified name from the current directory. | |
void | ResetBit (UInt_t f) |
virtual void | SaveAs (const char *filename="", Option_t *option="") const |
Save this object in the file specified by filename. | |
virtual void | SavePrimitive (std::ostream &out, Option_t *option="") |
Save a primitive as a C++ statement(s) on output stream "out". | |
void | SetBit (UInt_t f) |
void | SetBit (UInt_t f, Bool_t set) |
Set or unset the user status bits as specified in f. | |
virtual void | SetDrawOption (Option_t *option="") |
Set drawing option for object. | |
virtual void | SetUniqueID (UInt_t uid) |
Set the unique object id. | |
void | StreamerNVirtual (TBuffer &ClassDef_StreamerNVirtual_b) |
virtual void | SysError (const char *method, const char *msgfmt,...) const |
Issue system error message. | |
R__ALWAYS_INLINE Bool_t | TestBit (UInt_t f) const |
Int_t | TestBits (UInt_t f) const |
virtual void | UseCurrentStyle () |
Set current style settings in this object This function is called when either TCanvas::UseCurrentStyle or TROOT::ForceStyle have been invoked. | |
virtual void | Warning (const char *method, const char *msgfmt,...) const |
Issue warning message. | |
virtual Int_t | Write (const char *name=nullptr, Int_t option=0, Int_t bufsize=0) |
Write this object to the current directory. | |
virtual Int_t | Write (const char *name=nullptr, Int_t option=0, Int_t bufsize=0) const |
Write this object to the current directory. | |
Static Public Member Functions | |
static TClass * | Class () |
static const char * | Class_Name () |
static constexpr Version_t | Class_Version () |
static const char * | DeclFileName () |
Static Public Member Functions inherited from TNamed | |
static TClass * | Class () |
static const char * | Class_Name () |
static constexpr Version_t | Class_Version () |
static const char * | DeclFileName () |
Static Public Member Functions inherited from TObject | |
static TClass * | Class () |
static const char * | Class_Name () |
static constexpr Version_t | Class_Version () |
static const char * | DeclFileName () |
static Longptr_t | GetDtorOnly () |
Return destructor only flag. | |
static Bool_t | GetObjectStat () |
Get status of object stat flag. | |
static void | SetDtorOnly (void *obj) |
Set destructor only flag. | |
static void | SetObjectStat (Bool_t stat) |
Turn on/off tracking of objects in the TObjectTable. | |
Protected Member Functions | |
void | calcPulls () |
Calculate the pulls for all fit parameters in the fit results data set, and add them to that dataset. | |
RooFit::OwningPtr< RooFitResult > | doFit (RooAbsData *genSample) |
Internal function. Performs actual fit according to specifications. | |
bool | fitSample (RooAbsData *genSample) |
Internal method. | |
RooPlot * | makeFrameAndPlotCmd (const RooRealVar ¶m, RooLinkedList &cmdList, bool symRange=false) const |
Internal function. | |
void | RecursiveRemove (TObject *obj) override |
If one of the TObject we have a referenced to is deleted, remove the reference. | |
RooFit::OwningPtr< RooFitResult > | refit (RooAbsData *genSample=nullptr) |
Redo fit on 'current' toy sample, or if genSample is not nullptr do fit on given sample instead. | |
void | resetFitParams () |
Reset all fit parameters to the initial model parameters at the time of the RooMCStudy constructor. | |
bool | run (bool generate, bool fit, Int_t nSamples, Int_t nEvtPerSample, bool keepGenData, const char *asciiFilePat) |
Run engine method. | |
Protected Member Functions inherited from TObject | |
virtual void | DoError (int level, const char *location, const char *fmt, va_list va) const |
Interface to ErrorHandler (protected). | |
void | MakeZombie () |
Protected Attributes | |
RooArgSet | _allDependents |
List of generate + prototype dependents. | |
bool | _binGenData |
bool | _canAddFitResults |
Allow adding of external fit results? | |
std::unique_ptr< RooAbsGenContext > | _constrGenContext |
Generator context for constraints p.d.f. | |
std::unique_ptr< RooAbsPdf > | _constrPdf |
Constraints p.d.f. | |
RooArgSet | _dependents |
List of dependents. | |
bool | _extendedGen |
RooArgSet | _fitInitParams |
List of initial values of fit parameters. | |
RooAbsPdf * | _fitModel |
Fit model. | |
RooLinkedList | _fitOptList |
RooArgSet | _fitParams |
List of actual fit parameters. | |
std::unique_ptr< RooDataSet > | _fitParData |
TList | _fitResList |
std::unique_ptr< RooAbsGenContext > | _genContext |
Generator context. | |
TList | _genDataList |
RooArgSet | _genInitParams |
List of original generator parameters. | |
RooAbsPdf * | _genModel = nullptr |
Generator model. | |
RooArgSet | _genParams |
List of actual generator parameters. | |
std::unique_ptr< RooDataSet > | _genParData |
const RooDataSet * | _genProtoData |
Generator prototype data set. | |
RooAbsData * | _genSample = nullptr |
Currently generated sample. | |
std::list< RooAbsMCStudyModule * > | _modList |
List of additional study modules ;. | |
double | _nExpGen |
std::unique_ptr< RooRealVar > | _ngenVar |
std::unique_ptr< RooRealVar > | _nllVar |
bool | _perExptGenParams = false |
Do generation parameter change per event? | |
RooArgSet | _projDeps |
List of projected dependents in fit. | |
bool | _randProto |
bool | _silence |
Silent running mode? | |
bool | _verboseGen |
Verbose generation? | |
Protected Attributes inherited from TNamed | |
TString | fName |
TString | fTitle |
Private Member Functions | |
RooMCStudy (const RooMCStudy &) | |
Friends | |
class | RooAbsMCStudyModule |
Additional Inherited Members | |
Public Types inherited from TObject | |
enum | { kIsOnHeap = 0x01000000 , kNotDeleted = 0x02000000 , kZombie = 0x04000000 , kInconsistent = 0x08000000 , kBitMask = 0x00ffffff } |
enum | { kSingleKey = (1ULL << ( 0 )) , kOverwrite = (1ULL << ( 1 )) , kWriteDelete = (1ULL << ( 2 )) } |
enum | EDeprecatedStatusBits { kObjInCanvas = (1ULL << ( 3 )) } |
enum | EStatusBits { kCanDelete = (1ULL << ( 0 )) , kMustCleanup = (1ULL << ( 3 )) , kIsReferenced = (1ULL << ( 4 )) , kHasUUID = (1ULL << ( 5 )) , kCannotPick = (1ULL << ( 6 )) , kNoContextMenu = (1ULL << ( 8 )) , kInvalidObject = (1ULL << ( 13 )) } |
Protected Types inherited from TObject | |
enum | { kOnlyPrepStep = (1ULL << ( 3 )) } |
#include <RooMCStudy.h>
RooMCStudy::RooMCStudy | ( | const RooAbsPdf & | model, |
const RooArgSet & | observables, | ||
const RooCmdArg & | arg1 = {} , |
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const RooCmdArg & | arg2 = {} , |
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const RooCmdArg & | arg3 = {} , |
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const RooCmdArg & | arg4 = {} , |
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const RooCmdArg & | arg5 = {} , |
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const RooCmdArg & | arg6 = {} , |
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const RooCmdArg & | arg7 = {} , |
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const RooCmdArg & | arg8 = {} |
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) |
Construct Monte Carlo Study Manager.
This class automates generating data from a given PDF, fitting the PDF to data and accumulating the fit statistics.
[in] | model | The PDF to be studied |
[in] | observables | The variables of the PDF to be considered observables |
[in] | arg1,arg2,arg3,arg4,arg5,arg6,arg7,arg8 | Optional arguments according to table below. |
Optional arguments | |
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Silence() | Suppress all RooFit messages during running below PROGRESS level |
FitModel(const RooAbsPdf&) | The PDF for fitting if it is different from the PDF for generating. |
ConditionalObservables(const RooArgSet& set) | The set of observables that the PDF should not be normalized over |
Binned(bool flag) | Bin the dataset before fitting it. Speeds up fitting of large data samples |
FitOptions(....) | Options to be used for fitting. All named arguments inside FitOptions() are passed to RooAbsPdf::fitTo(). Save() is especially interesting to be able to retrieve fit results of each run using fitResult(). |
Verbose(bool flag) | Activate informational messages in event generation phase |
Extended(bool flag) | Determine number of events for each sample anew from a Poisson distribution |
Constrain(const RooArgSet& pars) | Apply internal constraints on given parameters in fit and sample constrained parameter values from constraint p.d.f for each toy. |
ProtoData(const RooDataSet&, bool randOrder) | Prototype data for the event generation. If the randOrder flag is set, the order of the dataset will be re-randomized for each generation cycle to protect against systematic biases if the number of generated events does not exactly match the number of events in the prototype dataset at the cost of reduced precision with mu equal to the specified number of events |
Definition at line 105 of file RooMCStudy.cxx.
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override |
Definition at line 288 of file RooMCStudy.cxx.
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private |
bool RooMCStudy::addFitResult | ( | const RooFitResult & | fr | ) |
Utility function to add fit result from external fit to this RooMCStudy and process its results through the standard RooMCStudy statistics gathering tools.
This function allows users to run the toy MC generation and/or fitting in a distributed way and to collect and analyze the results in a RooMCStudy as if they were run locally.
This method is only functional if this RooMCStudy object is cleanm, i.e. it was not used to generate and/or fit any samples.
Definition at line 693 of file RooMCStudy.cxx.
void RooMCStudy::addModule | ( | RooAbsMCStudyModule & | module | ) |
Insert given RooMCStudy add-on module to the processing chain of this MCStudy object.
Definition at line 300 of file RooMCStudy.cxx.
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protected |
Calculate the pulls for all fit parameters in the fit results data set, and add them to that dataset.
Definition at line 727 of file RooMCStudy.cxx.
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static |
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inlinestaticconstexpr |
Definition at line 152 of file RooMCStudy.h.
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inlinestatic |
Definition at line 152 of file RooMCStudy.h.
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protected |
Internal function. Performs actual fit according to specifications.
Definition at line 588 of file RooMCStudy.cxx.
Fit 'nSamples' datasets, which are read from ASCII files.
The ascii file pattern, which is a template for snprintf, should look something like "data/toymc_%04d.dat" and should contain one integer field that encodes the sample serial number.
Definition at line 542 of file RooMCStudy.cxx.
Fit 'nSamples' datasets, as supplied in 'dataSetList'.
Definition at line 557 of file RooMCStudy.cxx.
Return an argset with the fit parameters for the given sample number.
NB: The fit parameters are only stored for successful fits, thus the maximum sampleNum can be less that the number of generated samples and if so, the indices will be out of synch with genData() and fitResult()
Definition at line 813 of file RooMCStudy.cxx.
const RooDataSet & RooMCStudy::fitParDataSet | ( | ) |
Return a RooDataSet containing the post-fit parameters of each toy cycle.
This dataset also contains any additional output that was generated by study modules that were added to this RooMCStudy. By default, the two following variables are added (apart from fit parameters):
Definition at line 793 of file RooMCStudy.cxx.
const RooFitResult * RooMCStudy::fitResult | ( | Int_t | sampleNum | ) | const |
Return the RooFitResult of the fit with the given run number.
FitOptions(Save(), ...)
to the constructor. Definition at line 831 of file RooMCStudy.cxx.
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protected |
Internal method.
Fit given dataset with fit model. If fit converges (TMinuit status code zero) The fit results are appended to the fit results dataset
If the fit option "r" is supplied, the RooFitResult objects will always be saved, regardless of the fit status. RooFitResults objects can be retrieved later via fitResult().
Definition at line 648 of file RooMCStudy.cxx.
RooAbsData * RooMCStudy::genData | ( | Int_t | sampleNum | ) | const |
Return the given generated dataset.
This method will only return datasets if during the run cycle it was indicated that generator data should be saved.
Definition at line 856 of file RooMCStudy.cxx.
bool RooMCStudy::generate | ( | Int_t | nSamples, |
Int_t | nEvtPerSample = 0 , |
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bool | keepGenData = false , |
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const char * | asciiFilePat = nullptr |
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) |
Generate 'nSamples' samples of 'nEvtPerSample' events.
If keepGenData is set, all generated data sets will be kept in memory and can be accessed later via genData().
Data sets will be written out in ascii form if the pattern string is supplied. The pattern, which is a template for snprintf, should look something like "data/toymc_%04d.dat" and should contain one integer field that encodes the sample serial number.
Definition at line 525 of file RooMCStudy.cxx.
bool RooMCStudy::generateAndFit | ( | Int_t | nSamples, |
Int_t | nEvtPerSample = 0 , |
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bool | keepGenData = false , |
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const char * | asciiFilePat = nullptr |
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) |
Generate and fit 'nSamples' samples of 'nEvtPerSample' events.
If keepGenData is set, all generated data sets will be kept in memory and can be accessed later via genData().
Data sets will be written out in ascii form if the pattern string is supplied. The pattern, which is a template for snprintf, should look something like "data/toymc_%04d.dat" and should contain one integer field that encodes the sample serial number.
Definition at line 503 of file RooMCStudy.cxx.
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inline |
Return dataset with generator parameters for each toy.
When constraints are used these may generally not be the same as the fitted parameters.
Definition at line 60 of file RooMCStudy.h.
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inlineoverridevirtual |
Reimplemented from TObject.
Definition at line 152 of file RooMCStudy.h.
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protected |
Internal function.
Construct RooPlot from given parameter and modify the list of named arguments 'cmdList' to only contain the plot arguments that should be forwarded to RooAbsData::plotOn()
Definition at line 1143 of file RooMCStudy.cxx.
RooMCStudy::plotError | ( | const RooRealVar & | param, |
const RooCmdArg & | arg1 = {} , |
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const RooCmdArg & | arg2 = {} , |
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const RooCmdArg & | arg3 = {} , |
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const RooCmdArg & | arg4 = {} , |
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const RooCmdArg & | arg5 = {} , |
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const RooCmdArg & | arg6 = {} , |
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const RooCmdArg & | arg7 = {} , |
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const RooCmdArg & | arg8 = {} |
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) |
Plot the distribution of the fit errors for the specified parameter on a newly created frame.
Optional arguments | |
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FrameRange(double lo, double hi) | Set range of frame to given specification |
FrameBins(int bins) | Set default number of bins of frame to given number |
Frame() | Pass supplied named arguments to RooAbsRealLValue::frame() function. See there for list of allowed arguments |
If no frame specifications are given, the AutoRange() feature will be used to set a default range. Any other named argument is passed to the RooAbsData::plotOn() call. See that function for allowed options.
The RooMCStudy::plotError() function is pythonized with the command argument pythonization. The keywords must correspond to the CmdArg of the function.
Definition at line 986 of file RooMCStudy.cxx.
RooPlot * RooMCStudy::plotError | ( | const RooRealVar & | param, |
double | lo, | ||
double | hi, | ||
Int_t | nbins = 100 |
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) |
Create a RooPlot of the distribution of the fitted errors of the given parameter.
The frame is created with a range [lo,hi] and plotted data will be binned in 'nbins' bins
Definition at line 1213 of file RooMCStudy.cxx.
RooMCStudy::plotNLL | ( | const RooCmdArg & | arg1 = {} , |
const RooCmdArg & | arg2 = {} , |
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const RooCmdArg & | arg3 = {} , |
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const RooCmdArg & | arg4 = {} , |
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const RooCmdArg & | arg5 = {} , |
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const RooCmdArg & | arg6 = {} , |
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const RooCmdArg & | arg7 = {} , |
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const RooCmdArg & | arg8 = {} |
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) |
Plot the distribution of the -log(L) values on a newly created frame.
Optional arguments | |
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FrameRange(double lo, double hi) | Set range of frame to given specification |
FrameBins(int bins) | Set default number of bins of frame to given number |
Frame() | Pass supplied named arguments to RooAbsRealLValue::frame() function. See there for list of allowed arguments |
If no frame specifications are given, the AutoRange() feature will be used to set the range. Any other named argument is passed to the RooAbsData::plotOn() call. See that function for allowed options
The RooMCStudy::plotNLL() function is pythonized with the command argument pythonization. The keywords must correspond to the CmdArg of the function.
Definition at line 962 of file RooMCStudy.cxx.
Create a RooPlot of the -log(L) distribution in the range lo-hi with 'nBins' bins.
Definition at line 1199 of file RooMCStudy.cxx.
RooMCStudy::plotParam | ( | const char * | paramName, |
const RooCmdArg & | arg1 = {} , |
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const RooCmdArg & | arg2 = {} , |
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const RooCmdArg & | arg3 = {} , |
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const RooCmdArg & | arg4 = {} , |
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const RooCmdArg & | arg5 = {} , |
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const RooCmdArg & | arg6 = {} , |
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const RooCmdArg & | arg7 = {} , |
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const RooCmdArg & | arg8 = {} |
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) |
Plot the distribution of the fitted value of the given parameter on a newly created frame.
Optional arguments | |
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FrameRange(double lo, double hi) | Set range of frame to given specification |
FrameBins(int bins) | Set default number of bins of frame to given number |
Frame() | Pass supplied named arguments to RooAbsRealLValue::frame() function. See there for list of allowed arguments |
If no frame specifications are given, the AutoRange() feature will be used to set the range Any other named argument is passed to the RooAbsData::plotOn() call. See that function for allowed options
The RooMCStudy::plotParam() function is pythonized with the command argument pythonization. The keywords must correspond to the CmdArg of the function.
Definition at line 906 of file RooMCStudy.cxx.
RooMCStudy::plotParam | ( | const RooRealVar & | param, |
const RooCmdArg & | arg1 = {} , |
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const RooCmdArg & | arg2 = {} , |
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const RooCmdArg & | arg3 = {} , |
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const RooCmdArg & | arg4 = {} , |
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const RooCmdArg & | arg5 = {} , |
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const RooCmdArg & | arg6 = {} , |
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const RooCmdArg & | arg7 = {} , |
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const RooCmdArg & | arg8 = {} |
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) |
Plot the distribution of the fitted value of the given parameter on a newly created frame.
Optional arguments | |
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FrameRange(double lo, double hi) | Set range of frame to given specification |
FrameBins(int bins) | Set default number of bins of frame to given number |
Frame() | Pass supplied named arguments to RooAbsRealLValue::frame() function. See there for list of allowed arguments |
If no frame specifications are given, the AutoRange() feature will be used to set the range Any other named argument is passed to the RooAbsData::plotOn() call. See that function for allowed options
The RooMCStudy::plotParam() function is pythonized with the command argument pythonization. The keywords must correspond to the CmdArg of the function.
The RooMCStudy::plotParam() function is pythonized with the command argument pythonization. The keywords must correspond to the CmdArg of the function.
Definition at line 928 of file RooMCStudy.cxx.
RooMCStudy::plotParamOn | ( | RooPlot * | frame, |
const RooCmdArg & | arg1 = {} , |
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const RooCmdArg & | arg2 = {} , |
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const RooCmdArg & | arg3 = {} , |
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const RooCmdArg & | arg4 = {} , |
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const RooCmdArg & | arg5 = {} , |
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const RooCmdArg & | arg6 = {} , |
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const RooCmdArg & | arg7 = {} , |
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const RooCmdArg & | arg8 = {} |
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) |
Plot the distribution of fitted values of a parameter.
The parameter shown is the one from which the RooPlot was created, e.g.
RooPlot* frame = param.frame(100,-10,10) ; mcstudy.paramOn(frame,LineStyle(kDashed)) ;
Any named arguments passed to plotParamOn() are forwarded to the underlying plotOn() call
The RooMCStudy::plotParamOn() function is pythonized with the command argument pythonization. The keywords must correspond to the CmdArg of the function.
Definition at line 884 of file RooMCStudy.cxx.
RooMCStudy::plotPull | ( | const RooRealVar & | param, |
const RooCmdArg & | arg1, | ||
const RooCmdArg & | arg2 = {} , |
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const RooCmdArg & | arg3 = {} , |
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const RooCmdArg & | arg4 = {} , |
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const RooCmdArg & | arg5 = {} , |
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const RooCmdArg & | arg6 = {} , |
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const RooCmdArg & | arg7 = {} , |
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const RooCmdArg & | arg8 = {} |
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) |
Plot the distribution of pull values for the specified parameter on a newly created frame.
If asymmetric errors are calculated in the fit (by MINOS) those will be used in the pull calculation.
If the parameters of the models for generation and fit differ, simple heuristics are used to find the corresponding parameters:
Further options:
Arguments | Effect |
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FrameRange(double lo, double hi) | Set range of frame to given specification |
FrameBins(int bins) | Set default number of bins of frame to given number |
Frame() | Pass supplied named arguments to RooAbsRealLValue::frame() function. See there for list of allowed arguments |
FitGauss(bool flag) | Add a gaussian fit to the frame |
If no frame specifications are given, the AutoSymRange() feature will be used to set a default range. Any other named argument is passed to the RooAbsData::plotOn(). See that function for allowed options.
If you want to have more control over the Gaussian fit to the pull distribution, you can also do it after the call to plotPull():
The RooMCStudy::plotError() function is pythonized with the command argument pythonization. The keywords must correspond to the CmdArg of the function.
Definition at line 1087 of file RooMCStudy.cxx.
RooPlot * RooMCStudy::plotPull | ( | const RooRealVar & | param, |
double | lo = -3.0 , |
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double | hi = 3.0 , |
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Int_t | nbins = 25 , |
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bool | fitGauss = false |
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) |
Create a RooPlot of the pull distribution for the given parameter.
The range lo-hi is plotted in nbins. If fitGauss is set, an unbinned ML fit of the distribution to a Gaussian p.d.f is performed. The fit result is overlaid on the returned RooPlot and a box with the fitted mean and sigma is added.
If the parameters of the models for generation and fit differ, simple heuristics are used to find the corresponding parameters:
Definition at line 1242 of file RooMCStudy.cxx.
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overrideprotectedvirtual |
If one of the TObject we have a referenced to is deleted, remove the reference.
Reimplemented from TObject.
Definition at line 1275 of file RooMCStudy.cxx.
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Redo fit on 'current' toy sample, or if genSample is not nullptr do fit on given sample instead.
Definition at line 621 of file RooMCStudy.cxx.
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Reset all fit parameters to the initial model parameters at the time of the RooMCStudy constructor.
Definition at line 578 of file RooMCStudy.cxx.
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Run engine method.
Generate and/or fit, according to flags, 'nSamples' samples of 'nEvtPerSample' events. If keepGenData is set, all generated data sets will be kept in memory and can be accessed later via genData().
When generating, data sets will be written out in ascii form if the pattern string is supplied The pattern, which is a template for snprintf, should look something like "data/toymc_%04d.dat" and should contain one integer field that encodes the sample serial number.
When fitting only, data sets may optionally be read from ascii files, using the same file pattern.
Definition at line 321 of file RooMCStudy.cxx.
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overridevirtual |
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inline |
Definition at line 152 of file RooMCStudy.h.
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friend |
Definition at line 97 of file RooMCStudy.h.
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List of generate + prototype dependents.
Definition at line 119 of file RooMCStudy.h.
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Definition at line 132 of file RooMCStudy.h.
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Allow adding of external fit results?
Definition at line 136 of file RooMCStudy.h.
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Generator context for constraints p.d.f.
Definition at line 116 of file RooMCStudy.h.
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Constraints p.d.f.
Definition at line 115 of file RooMCStudy.h.
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List of dependents.
Definition at line 118 of file RooMCStudy.h.
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Definition at line 131 of file RooMCStudy.h.
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List of initial values of fit parameters.
Definition at line 121 of file RooMCStudy.h.
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Fit model.
Definition at line 120 of file RooMCStudy.h.
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Definition at line 130 of file RooMCStudy.h.
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List of actual fit parameters.
Definition at line 122 of file RooMCStudy.h.
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Definition at line 129 of file RooMCStudy.h.
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Definition at line 127 of file RooMCStudy.h.
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Generator context.
Definition at line 109 of file RooMCStudy.h.
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Definition at line 126 of file RooMCStudy.h.
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List of original generator parameters.
Definition at line 110 of file RooMCStudy.h.
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Generator model.
Definition at line 108 of file RooMCStudy.h.
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List of actual generator parameters.
Definition at line 111 of file RooMCStudy.h.
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Definition at line 128 of file RooMCStudy.h.
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Generator prototype data set.
Definition at line 112 of file RooMCStudy.h.
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Currently generated sample.
Definition at line 107 of file RooMCStudy.h.
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List of additional study modules ;.
Definition at line 141 of file RooMCStudy.h.
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Definition at line 133 of file RooMCStudy.h.
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Definition at line 124 of file RooMCStudy.h.
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Definition at line 123 of file RooMCStudy.h.
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Do generation parameter change per event?
Definition at line 138 of file RooMCStudy.h.
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List of projected dependents in fit.
Definition at line 113 of file RooMCStudy.h.
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Definition at line 134 of file RooMCStudy.h.
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Silent running mode?
Definition at line 139 of file RooMCStudy.h.
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Verbose generation?
Definition at line 137 of file RooMCStudy.h.